Hi,

I'm in the process of patching a couple spkgs that use autotools build
systems.  I've done this in the past in Sage but it's never been quite
clear to me what the correct process should be.  In this particular
case I am patching both confgure.ac and Makefile.am files.

Should I add just patches for the input files, or should I also
include patches for the output files (configure, Makefile(.in), etc.)?
 Should I merge them all together or keep them separate?

Further, for patching the generated files, what's a good way to go
about that?  If I don't have the exact versions of autoconf and
automake as were used in the upstream sources then I can wind up with
a lot of unrelated changes in the generated files.  How are you
normally dealing with that?

I couldn't find any guidance on this in
http://doc.sagemath.org/html/en/developer/

Thanks,
Erik

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