On Sat, Dec 12, 2009 at 12:13 AM, Tim Joseph Dumol <t...@timdumol.com> wrote:
> You will want to replace /local/jec/sage-4.3.rc0/local/ > lib/gcc-lib/i686-pc-linux-gnu/4.0.3/libgcc_s.so.1 with your local version > of libgcc_s.so. Alternatively, you can set $SAGE_FORTRAN and > $SAGE_FORTRAN_LIB to your system's fortran compiler and library. This is > caused by the fortran spkg building its own libgcc, iirc. > > > As a note, setting $SAGE_FORTRAN and $SAGE_FORTRNA_LIB only fixes the problem if the build is restarted from scratch. > On Sat, Dec 12, 2009 at 12:00 AM, John Cremona <john.crem...@gmail.com>wrote: > >> I reported this before, hoping for some help from a build guru, with >> no success, so I'll try again. >> >> My desktop machine was upgraded over the summer (it's an official >> university-supported version of Suse: >> cat /proc/version >> Linux version 2.6.27.37-0.1-pae (ge...@buildhost) (gcc version 4.3.2 >> [gcc-4_3-branch revision 141291] (SUSE Linux) ) #1 SMP 2009-10-15 >> 14:56:58 +0200) >> >> and since then I have not been able to build or run Sage. the build >> fails near the end of building R, like this: >> >> ... >> mkdir -p -- ../../../library/base/po >> mkdir -p -- ../../../library/base/man >> make[6]: Leaving directory >> `/local/jec/sage-4.3.rc0/spkg/build/r-2.9.2/src/src/library/base' >> /home/masgaj/local/sage-4.3.rc0/spkg/build/r-2.9.2/src/bin/exec/R: >> >> /local/jec/sage-4.3.rc0/local/lib/gcc-lib/i686-pc-linux-gnu/4.0.3/libgcc_s.so.1: >> version `GCC_4.2.0' not found (required by /usr/lib/libstdc++.so.6) >> make[5]: *** [all] Error 1 >> make[5]: Leaving directory >> `/local/jec/sage-4.3.rc0/spkg/build/r-2.9.2/src/src/library/base' >> make[4]: *** [R] Error 1 >> make[4]: Leaving directory >> `/local/jec/sage-4.3.rc0/spkg/build/r-2.9.2/src/src/library' >> make[3]: *** [R] Error 1 >> make[3]: Leaving directory >> `/local/jec/sage-4.3.rc0/spkg/build/r-2.9.2/src/src' >> make[2]: *** [R] Error 1 >> make[2]: Leaving directory >> `/local/jec/sage-4.3.rc0/spkg/build/r-2.9.2/src' >> Error building R. >> >> real 1m18.944s >> user 0m50.663s >> sys 0m20.685s >> sage: An error occurred while installing r-2.9.2 >> Please email sage-devel http://groups.google.com/group/sage-devel >> explaining the problem and send the relevant part of >> of /home/masgaj/local/sage-4.3.rc0/install.log. Describe your >> computer, operating system, etc. >> If you want to try to fix the problem yourself, *don't* just cd to >> /home/masgaj/local/sage-4.3.rc0/spkg/build/r-2.9.2 and type 'make'. >> Instead type "/home/masgaj/local/sage-4.3.rc0/sage -sh" >> in order to set all environment variables correctly, then cd to >> /home/masgaj/local/sage-4.3.rc0/spkg/build/r-2.9.2 >> (When you are done debugging, you can type "exit" to leave the >> subshell.) >> make[1]: *** [installed/r-2.9.2] Error 1 >> make[1]: Leaving directory `/local/jec/sage-4.3.rc0/spkg' >> >> real 68m40.725s >> user 58m34.888s >> sys 7m30.928s >> Error building Sage. >> >> >> Here's the gcc version: >> >> gcc -v >> Using built-in specs. >> Target: i586-suse-linux >> Configured with: ../configure --prefix=/usr --infodir=/usr/share/info >> --mandir=/usr/share/man --libdir=/usr/lib --libexecdir=/usr/lib >> --enable-languages=c,c++,objc,fortran,obj-c++,java,ada >> --enable-checking=release --with-gxx-include-dir=/usr/include/c++/4.3 >> --enable-ssp --disable-libssp --with-bugurl=http://bugs.opensuse.org/ >> --with-pkgversion='SUSE<http://bugs.opensuse.org/%0A--with-pkgversion=%27SUSE>Linux' >> --disable-libgcj --disable-libmudflap >> --with-slibdir=/lib --with-system-zlib --enable-__cxa_atexit >> --enable-libstdcxx-allocator=new --disable-libstdcxx-pch >> --enable-version-specific-runtime-libs --program-suffix=-4.3 >> --enable-linux-futex --without-system-libunwind --with-cpu=generic >> --build=i586-suse-linux >> Thread model: posix >> gcc version 4.3.2 [gcc-4_3-branch revision 141291] (SUSE Linux) >> >> The full install log is at >> http://www.warwick.ac.uk/staff/J.E.Cremona/install.log.gz >> >> John >> >> -- >> To post to this group, send an email to sage-devel@googlegroups.com >> To unsubscribe from this group, send an email to >> sage-devel+unsubscr...@googlegroups.com<sage-devel%2bunsubscr...@googlegroups.com> >> For more options, visit this group at >> http://groups.google.com/group/sage-devel >> URL: http://www.sagemath.org >> > > > > -- > Tim Joseph Dumol <tim (at) timdumol (dot) com> > http://timdumol.com > -- Tim Joseph Dumol <tim (at) timdumol (dot) com> http://timdumol.com -- To post to this group, send an email to sage-devel@googlegroups.com To unsubscribe from this group, send an email to sage-devel+unsubscr...@googlegroups.com For more options, visit this group at http://groups.google.com/group/sage-devel URL: http://www.sagemath.org
