Hello folks,

here goes alpha1 with another massive amount of fixes. No details from
me since I need to get some sleep, but overall 113 tickets have been
fixed in 3.3 for now. Tomorrow's SD12 seesion will concentrate on
reviews, so expect another alpha in the next 24 hours. Various build
issues are still open, but we will get to them in time. As usual a
sage.math binary as well as sources can be found in

   http://sage.math.washington.edu/home/mabshoff/release-cycles-3.3/

As usual the upgrade should also work. Please give it a spin and
report any problem with building or doctests.

Cheers,

Michael

Merged in Sage 3.3.alpha1:

#22: Michael Abshoff: add persistent SAGE64 building switch on OSX and
Solaris [Reviewed by Robert Miller]
#313: Mike Hansen: Slideshow doesn't update correctly when first cell
deleted. [Reviewed by Jason Grout]
#1019: Mike Hansen: strange behavior in notebook with %octave
[Reviewed by Jason Grout]
#1234: William Stein: analytic_rank crashes [Reviewed by John Cremona]
#1897: Mike Hansen: %latex -- bug in passing in predefined sage
variables [Reviewed by Jason Grout]
#2578: Craig Citro: make bernoulli_polynomial independent of maxima
[Reviewed by William Stein]
#2789: Nick Alexander: multivariate polynomials over residue fields of
number fields are broken [Reviewed by Nick Alexander]
#3124: Mike Hansen: bug in solve_mod [Reviewed by Alex Ghitza]
#3185: Michael Abshoff: fix 64 bit OSX build support for f2c [Reviewed
by Robert Miller]
#3227: Michael Abshoff: add 64 bit OSX build support for tachyon
[Reviewed by Robert Miller]
#3229: Michael Abshoff: add 64 bit OSX build support to flintqs
[Reviewed by Robert Miller]
#3321: Martin Albrecht: Matrix.visualize_structure is too dark/messed
up [Reviewed by Dan Drake]
#3544: William Stein: PermutationGroup.is_transitive is broken
[Reviewed by Robert Miller]
#3571: Craig Citro: ivalue field in integer_mod.pyx shouldn't be
public [Reviewed by Robert Bradshaw]
#3830: Robert Miller: plot(sin(1/x), (x,-1,3), foo=10) yields an error
message about line, but should yield one about plot. [Reviewed by Dan
Drake]
#4010: Mike Hansen: notebook -- Renaming worksheet: clicking OK with a
blank text box should revert to worksheet's old name not name it to
"null" [Reviewed by Jason Grout]
#4152: Mike Hansen, Jason Grout: parametric_plot should take the
variable range as (var, min, max) like plot [Reviewed by Jason Grout,
Mike Hansen]
#4523: Mike Hansen: browser cache not cleared when restarting the
worksheet [Reviewed by Dan Drake]
#4563: Jason Grout: polar plot does not accept (t, 0, 2*pi) syntax for
the interval [Reviewed by Robert Bradshaw]
#4590: Mike Hansen: sage/interfaces/phc.py writes tmp files into cwd
[Reviewed by Jason Grout]
#4616: Robert Miller: cosine_series_coefficient hangs [Reviewed by
David Joyner]
#4626: Robert Miller: error in bessel_J(0,0) [Reviewed by Paul
Zimmermann]
#4733: Jason Grout: matrix exponential for general matrices [Reviewed
by Alex Ghitza]
#4757: Mike Hansen, Jason Grout: eigenspaces_right over CDF gives
total nonsense [Reviewed by Nick Alexander]
#4762: Alex Ghitza: Odd error message for congruence subgroups
[Reviewed by Nick Alexander]
#4818: William Stein: bug in list_plot3d -- invalid index? [Reviewed
by Robert Bradshaw]
#4820: John Cremona: Type inconsistency in rational points on elliptic
curves [Reviewed by Nick Alexander]
#4832: John Palmieri: prevent search_src and search_doc from printing
the sage banner [Reviewed by Nick Alexander]\
#4963: Jason Grout: Make a screen-full of whitespace at the bottom of
the notebook cells [Reviewed by Tom Boothby]
#4965: Martin Albrecht, Burcin Erocal: Z/nZ[x] via FLINT's zmod_poly
[Reviewed by Robert Bradshaw]
#4977: Nick Alexander: vector(RR vector) doesn't create a new vector
[Reviewed by Alex Ghitza]
#4988: John Cremona: major easy-to-fix but STUPID bug in gcd [Reviewed
by Nick Alexander]
#4992: Michael Abshoff: OSX 64 bit: add 64 bit build support for pynac
[Reviewed by Robert Miller]
#4993: Michael Abshoff: OSX 64 bit: add 64 bit build support for r
[Reviewed by Robert Miller]
#4994: Michael Abshoff: OSX 64 bit: add 64 bit build support for ghmm
[Reviewed by Robert Miller]
#4995: Michael Abshoff: OSX 64 bit: add 64 bit build support for
boehm_gc [Reviewed by Robert Miller]
#4996: Michael Abshoff: OSX64: add proper libcsage build support
[Reviewed by Robert Miller]
#4998: Michael Abshoff: OSX64: build Singular with "--with-
malloc=system" [Reviewed by Robert Miller]
#5028: Sebastien Labbe: point2d? says point.options instead of
point2d.options [Reviewed by Mike Hansen]
#5030: William Stein: get matrix/constructor.py up to 100% coverage
[Reviewed by Mike Hansen]
#5031: William Stein: get doctesting of matrix/misc.pyx up to 100%;
also make A.lift() 20 times faster by moving it [Reviewed by Robert
Bradshaw]
#5033: William Stein: matrix lift function bad in two ways [Reviewed
by Dan Drake]
#5034: William Stein: stupid output of sage -br: "using n
cpus" [Reviewed by Robert Miller]
#5035: William Stein: get doctest coverage of matrix_generic_dense.pyx
up to 100% [Reviewed by Dan Drake]
#5041: William Stein: make it so the magma .sig files in extcode don't
get written there by magma [Reviewed by Martin Albrecht]
#5045: William Stein: sage's "make check" should check that the sage
build flags (in sage-flags.txt) are right [Reviewed by Michael
Abshoff]
#5050: Mike Hansen: clean up how the percent directives at the top of
cells are processed [Review by Robert Miller]
#5057: Michael Abshoff: Add fortran-OSX64-20090120.spkg: to the
experimental spkg repo [Reviewed by Robert Miller]
#5058: Robert Miller: sage -f and sage -i is broken for local files
with ".spkg" elsewhere in the path [Reviewed by Tom Boothby]
#5059: Craig Citro: Fix a bunch of broken pickles [Reviewed by Robert
Bradshaw]


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