In my case these are the only packages installed by Sage, the rest come from the "system", via
./configure --enable-system-site-packages Why is there a red line below, is it a hanging link? On March 1, 2026 12:50:24 PM CST, Marc Culler <[email protected]> wrote: >I see: > >find . -name spkg-requirements.txt >./local/var/lib/sage/scripts/comm/spkg-requirements.txt >./local/var/lib/sage/scripts/pytest/spkg-requirements.txt >./local/var/lib/sage/scripts/distlib/spkg-requirements.txt >./local/var/lib/sage/scripts/ipykernel/spkg-requirements.txt >./local/var/lib/sage/scripts/filelock/spkg-requirements.txt >./local/var/lib/sage/scripts/pybind11/spkg-requirements.txt >./local/var/lib/sage/scripts/pathspec/spkg-requirements.txt >./local/var/lib/sage/scripts/pure_eval/spkg-requirements.txt >./local/var/lib/sage/scripts/tornado/spkg-requirements.txt >./local/var/lib/sage/scripts/pyproject_api/spkg-requirements.txt >./local/var/lib/sage/scripts/requests/spkg-requirements.txt >./local/var/lib/sage/scripts/gmpy2/spkg-requirements.txt >./local/var/lib/sage/scripts/pyparsing/spkg-requirements.txt >./local/var/lib/sage/scripts/conway_polynomials/spkg-requirements.txt >./local/var/lib/sage/scripts/pytz/spkg-requirements.txt >./local/var/lib/sage/scripts/virtualenv/spkg-requirements.txt >./local/var/lib/sage/scripts/primecountpy/spkg-requirements.txt >./local/var/lib/sage/scripts/tzdata/spkg-requirements.txt >./local/var/lib/sage/scripts/wheel/spkg-requirements.txt >./local/var/lib/sage/scripts/asttokens/spkg-requirements.txt >./local/var/lib/sage/scripts/networkx/spkg-requirements.txt >./local/var/lib/sage/scripts/meson/spkg-requirements.txt >./local/var/lib/sage/scripts/ipywidgets/spkg-requirements.txt >./local/var/lib/sage/scripts/pytz_deprecation_shim/spkg-requirements.txt >./local/var/lib/sage/scripts/pexpect/spkg-requirements.txt >./local/var/lib/sage/scripts/memory_allocator/spkg-requirements.txt >./local/var/lib/sage/scripts/pyproject_hooks/spkg-requirements.txt >./local/var/lib/sage/scripts/pygments/spkg-requirements.txt >./local/var/lib/sage/scripts/sphinxcontrib_htmlhelp/spkg-requirements.txt >./local/var/lib/sage/scripts/sage_setup/spkg-requirements.txt >./local/var/lib/sage/scripts/exceptiongroup/spkg-requirements.txt >./local/var/lib/sage/scripts/py/spkg-requirements.txt >./local/var/lib/sage/scripts/cython/spkg-requirements.txt >./local/var/lib/sage/scripts/entrypoints/spkg-requirements.txt >./local/var/lib/sage/scripts/flit_core/spkg-requirements.txt >./local/var/lib/sage/scripts/parso/spkg-requirements.txt >./local/var/lib/sage/scripts/debugpy/spkg-requirements.txt >./local/var/lib/sage/scripts/cachetools/spkg-requirements.txt >./local/var/lib/sage/scripts/tox/spkg-requirements.txt >./local/var/lib/sage/scripts/sphinx_inline_tabs/spkg-requirements.txt >./local/var/lib/sage/scripts/contourpy/spkg-requirements.txt >./local/var/lib/sage/scripts/hatch_vcs/spkg-requirements.txt >./local/var/lib/sage/scripts/sage_numerical_backends_coin/spkg-requirements.txt >./local/var/lib/sage/scripts/sortedcontainers/spkg-requirements.txt >./local/var/lib/sage/scripts/pytest_xdist/spkg-requirements.txt >./local/var/lib/sage/scripts/alabaster/spkg-requirements.txt >./local/var/lib/sage/scripts/roman_numerals/spkg-requirements.txt >./local/var/lib/sage/scripts/pip/spkg-requirements.txt >./local/var/lib/sage/scripts/gast/spkg-requirements.txt >./local/var/lib/sage/scripts/decorator/spkg-requirements.txt >./local/var/lib/sage/scripts/python_build/spkg-requirements.txt >./local/var/lib/sage/scripts/cffi/spkg-requirements.txt >./local/var/lib/sage/scripts/cycler/spkg-requirements.txt >./local/var/lib/sage/scripts/idna/spkg-requirements.txt >./local/var/lib/sage/scripts/beautifulsoup4/spkg-requirements.txt >./local/var/lib/sage/scripts/markupsafe/spkg-requirements.txt >./local/var/lib/sage/scripts/cvxopt/spkg-requirements.txt >./local/var/lib/sage/scripts/pythran/spkg-requirements.txt >./local/var/lib/sage/scripts/attrs/spkg-requirements.txt >./local/var/lib/sage/scripts/jinja2/spkg-requirements.txt >./local/var/lib/sage/scripts/chardet/spkg-requirements.txt >./local/var/lib/sage/scripts/pycparser/spkg-requirements.txt >./local/var/lib/sage/scripts/cypari/spkg-requirements.txt >./local/var/lib/sage/scripts/trove_classifiers/spkg-requirements.txt >./local/var/lib/sage/scripts/snowballstemmer/spkg-requirements.txt >./local/var/lib/sage/scripts/imagesize/spkg-requirements.txt >./local/var/lib/sage/scripts/jedi/spkg-requirements.txt >./local/var/lib/sage/scripts/iniconfig/spkg-requirements.txt >./local/var/lib/sage/scripts/pynormaliz/spkg-requirements.txt >./local/var/lib/sage/scripts/pyzmq/spkg-requirements.txt >./local/var/lib/sage/scripts/docutils/spkg-requirements.txt >./local/var/lib/sage/scripts/pycosat/spkg-requirements.txt >./local/var/lib/sage/scripts/furo/spkg-requirements.txt >./local/var/lib/sage/scripts/numpy/spkg-requirements.txt >./local/var/lib/sage/scripts/pyproject_metadata/spkg-requirements.txt >./local/var/lib/sage/scripts/packaging/spkg-requirements.txt >./local/var/lib/sage/scripts/sphinx_copybutton/spkg-requirements.txt >*./local/var/lib/sage/scripts/sagelib/spkg-requirements.txt* >./local/var/lib/sage/scripts/charset_normalizer/spkg-requirements.txt >./local/var/lib/sage/scripts/editables/spkg-requirements.txt >./local/var/lib/sage/scripts/pkgconfig/spkg-requirements.txt >./local/var/lib/sage/scripts/sphinxcontrib_jsmath/spkg-requirements.txt >./local/var/lib/sage/scripts/sphinxcontrib_qthelp/spkg-requirements.txt >./local/var/lib/sage/scripts/colorama/spkg-requirements.txt >./local/var/lib/sage/scripts/setuptools/spkg-requirements.txt >./local/var/lib/sage/scripts/dateutil/spkg-requirements.txt >./local/var/lib/sage/scripts/lrcalc_python/spkg-requirements.txt >./local/var/lib/sage/scripts/cppy/spkg-requirements.txt >./local/var/lib/sage/scripts/fpylll/spkg-requirements.txt >./local/var/lib/sage/scripts/urllib3/spkg-requirements.txt >./local/var/lib/sage/scripts/prompt_toolkit/spkg-requirements.txt >./local/var/lib/sage/scripts/kiwisolver/spkg-requirements.txt >./local/var/lib/sage/scripts/sphinxcontrib_websupport/spkg-requirements.txt >./local/var/lib/sage/scripts/meson_python/spkg-requirements.txt >./local/var/lib/sage/scripts/beniget/spkg-requirements.txt >./local/var/lib/sage/scripts/mpmath/spkg-requirements.txt >./local/var/lib/sage/scripts/sage_docbuild/spkg-requirements.txt >./local/var/lib/sage/scripts/setuptools_scm/spkg-requirements.txt >./local/var/lib/sage/scripts/fonttools/spkg-requirements.txt >./local/var/lib/sage/scripts/sphinx/spkg-requirements.txt >./local/var/lib/sage/scripts/six/spkg-requirements.txt >./local/var/lib/sage/scripts/platformdirs/spkg-requirements.txt >./local/var/lib/sage/scripts/gnumake_tokenpool/spkg-requirements.txt >./local/var/lib/sage/scripts/calver/spkg-requirements.txt >./local/var/lib/sage/scripts/stack_data/spkg-requirements.txt >./local/var/lib/sage/scripts/appdirs/spkg-requirements.txt >./local/var/lib/sage/scripts/jupyterlab_widgets/spkg-requirements.txt >./local/var/lib/sage/scripts/wcwidth/spkg-requirements.txt >./local/var/lib/sage/scripts/hypothesis/spkg-requirements.txt >./local/var/lib/sage/scripts/widgetsnbextension/spkg-requirements.txt >./local/var/lib/sage/scripts/matplotlib/spkg-requirements.txt >./local/var/lib/sage/scripts/sagetex/spkg-requirements.txt >./local/var/lib/sage/scripts/cysignals/spkg-requirements.txt >./local/var/lib/sage/scripts/pyrsistent/spkg-requirements.txt >./local/var/lib/sage/scripts/matplotlib_inline/spkg-requirements.txt >./local/var/lib/sage/scripts/scipy/spkg-requirements.txt >./local/var/lib/sage/scripts/soupsieve/spkg-requirements.txt >./local/var/lib/sage/scripts/traitlets/spkg-requirements.txt >./local/var/lib/sage/scripts/tzlocal/spkg-requirements.txt >./local/var/lib/sage/scripts/pillow/spkg-requirements.txt >./local/var/lib/sage/scripts/pplpy/spkg-requirements.txt >./local/var/lib/sage/scripts/sympy/spkg-requirements.txt >./local/var/lib/sage/scripts/sphinxcontrib_devhelp/spkg-requirements.txt >./local/var/lib/sage/scripts/pluggy/spkg-requirements.txt >./local/var/lib/sage/scripts/sphinxcontrib_applehelp/spkg-requirements.txt >./local/var/lib/sage/scripts/babel/spkg-requirements.txt >./local/var/lib/sage/scripts/nest_asyncio/spkg-requirements.txt >./local/var/lib/sage/scripts/ply/spkg-requirements.txt >./local/var/lib/sage/scripts/jupyter_core/spkg-requirements.txt >./local/var/lib/sage/scripts/execnet/spkg-requirements.txt >./local/var/lib/sage/scripts/ptyprocess/spkg-requirements.txt >./local/var/lib/sage/scripts/pysingular/spkg-requirements.txt >./local/var/lib/sage/scripts/pytest_mock/spkg-requirements.txt >./local/var/lib/sage/scripts/certifi/spkg-requirements.txt >./local/var/lib/sage/scripts/psutil/spkg-requirements.txt >./local/var/lib/sage/scripts/executing/spkg-requirements.txt >./local/var/lib/sage/scripts/pickleshare/spkg-requirements.txt >./local/var/lib/sage/scripts/sphinx_basic_ng/spkg-requirements.txt >./local/var/lib/sage/scripts/zipp/spkg-requirements.txt >./local/var/lib/sage/scripts/ipython_genutils/spkg-requirements.txt >./local/var/lib/sage/scripts/hatchling/spkg-requirements.txt >./local/var/lib/sage/scripts/hatch_readme/spkg-requirements.txt >./local/var/lib/sage/scripts/sphinxcontrib_serializinghtml/spkg-requirements.txt >./local/var/lib/sage/scripts/jupyter_client/spkg-requirements.txt >./local/var/lib/sage/scripts/p_group_cohomology/spkg-requirements.txt >./local/var/lib/sage/scripts/ipython/spkg-requirements.txt > >On Sunday, March 1, 2026 at 12:00:05 PM UTC-6 [email protected] wrote: > >> Besides, sagelib doesn't have spkg-requirements.txt, nor it has >> any sage/scripts/sagelib/ >> You're doing something non-standard, and without full details it's hard to >> say anything meaningful. >> sagelib is a not like the rest of the packages, anyway. >> >> >> In my SAGEROOT I see >> >> $ find . -name spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/jupyter_events/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/gnumake_tokenpool/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/tzdata/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/nbconvert/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/overrides/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/jupyterlab_mathjax2/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/types_python_dateutil/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/jupyter_server/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/pickleshare/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/mpmath/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/jupyter_sphinx/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/sagetex/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/jupyterlab_server/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/jupyter_lsp/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/notebook_shim/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/pytz_deprecation_shim/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/jupyterlab/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/ipympl/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/notebook/spkg-requirements.txt >> >> ./local/var/lib/sage/venv-python3.13/var/lib/sage/scripts/sagenb_export/spkg-requirements.txt >> >> On Sun, Mar 1, 2026 at 11:25 AM Dima Pasechnik <[email protected]> wrote: >> >>> >>> >>> On Sun, Mar 1, 2026 at 11:19 AM Marc Culler <[email protected]> wrote: >>> >>>> There is really only one file reported as >>>> missing:: sage/local/var/lib/sage/scripts/sagelib/spkg-requirements.txt. >>>> The other one is the directory containing that file. >>>> >>>> I did run ./bootstrap, of course. And it created the directory and the >>>> file. Moreover, both the directory and the file still exist and are both >>>> readable. >>>> >>> >>> Does /var/tmp/sage-10.9/local/var/lib/sage/scripts/sagelib exist? >>> (but you see "Directory >>> /var/tmp/sage-10.9/local/var/lib/sage/scripts/sagelib not found" ?) >>> >>> /var/tmp doesn't sound like something our build system uses normally. >>> IMHO all happens in SAGEROOT/build/sage-distro/ >>> >>> Dima >>> >>> >>> >>>> But if I verify that they exist, and then run make doc-html, it reports >>>> them both as missing. There is something wrong with the test. I wish I >>>> knew where the test was. >>>> >>>> - Marc >>>> >>>> >>>> >>>> On Saturday, February 28, 2026 at 2:21:55 PM UTC-6 [email protected] >>>> wrote: >>>> >>>>> some of these are generated by ./bootstrap >>>>> You need to run it either directly, or via make (the latter might be >>>>> flaky) >>>>> >>>>> >>>>> On February 28, 2026 1:08:10 PM CST, Marc Culler <[email protected]> >>>>> wrote: >>>>> >>>>>> I just tried make doc-html. I get: >>>>>> >>>>>> [sagelib-10.9.beta7] Warning: File >>>>>> /var/tmp/sage-10.9/local/var/lib/sage/scripts/sagelib/spkg-requirements.txt >>>>>> >>>>>> not found >>>>>> [sagelib-10.9.beta7] Warning: Directory >>>>>> /var/tmp/sage-10.9/local/var/lib/sage/scripts/sagelib not found >>>>>> [sagelib-10.9.beta7] Removing stamp file >>>>>> /var/tmp/sage-10.9/local/var/lib/sage/installed/sagelib-10.9.beta7 >>>>>> [sagelib-10.9.beta7] [spkg-install] Installing sagelib-10.9.beta7 >>>>>> [sagelib-10.9.beta7] [spkg-install] * Building wheel... >>>>>> >>>>>> Are the missing files in sage/scripts treated as missing >>>>>> dependencies? Why would they be missing? I did not delete them. >>>>>> >>>>>> - Marc >>>>>> >>>>>> On Sat, Feb 28, 2026 at 1:03 PM Dima Pasechnik <[email protected]> >>>>>> wrote: >>>>>> >>>>>>> For me, >>>>>>> >>>>>>> make doc-html >>>>>>> >>>>>>> does the right thing, building html docs, without extra work (after >>>>>>> `make` is done). >>>>>>> If one needs the docs, it makes sense to run >>>>>>> the above straight away, it's a bit quicker, as it avoids extra >>>>>>> regeneration of docs ninja targets by meson. >>>>>>> >>>>>>> Dima >>>>>>> >>>>>>> >>>>>>> >>>>>>> >>>>>>> >>>>>>> >>>>>>> >>>>>>> On February 28, 2026 11:13:44 AM CST, Marc Culler <[email protected]> >>>>>>> wrote: >>>>>>> >>>>>>>> When I build sage with make the last step is to build sagelib. If I >>>>>>>> then run >>>>>>>> make sagemath_doc_html >>>>>>>> it rebuilds the sagelib that it just finished building before >>>>>>>> starting to build the documentation. >>>>>>>> >>>>>>>> Why? >>>>>>>> >>>>>>>> - Marc >>>>>>>> >>>>>>>> -- >>>>>>> You received this message because you are subscribed to a topic in >>>>>>> the Google Groups "sage-devel" group. >>>>>>> To unsubscribe from this topic, visit >>>>>>> https://groups.google.com/d/topic/sage-devel/dVVleHx0xP0/unsubscribe. >>>>>>> To unsubscribe from this group and all its topics, send an email to >>>>>>> [email protected]. >>>>>>> To view this discussion visit >>>>>>> https://groups.google.com/d/msgid/sage-devel/FEA68B7E-8D2F-4957-A43A-D2FA9A0263BA%40gmail.com >>>>>>> >>>>>>> <https://groups.google.com/d/msgid/sage-devel/FEA68B7E-8D2F-4957-A43A-D2FA9A0263BA%40gmail.com?utm_medium=email&utm_source=footer> >>>>>>> . >>>>>>> >>>>>> -- >>>> >>> You received this message because you are subscribed to the Google Groups >>>> "sage-devel" group. >>>> To unsubscribe from this group and stop receiving emails from it, send >>>> an email to [email protected]. >>>> To view this discussion visit >>>> https://groups.google.com/d/msgid/sage-devel/48b8a758-b896-40ca-ac56-6fccfcef31fcn%40googlegroups.com >>>> >>>> <https://groups.google.com/d/msgid/sage-devel/48b8a758-b896-40ca-ac56-6fccfcef31fcn%40googlegroups.com?utm_medium=email&utm_source=footer> >>>> . >>>> >>> > >-- >You received this message because you are subscribed to the Google Groups >"sage-devel" group. >To unsubscribe from this group and stop receiving emails from it, send an >email to [email protected]. >To view this discussion visit >https://groups.google.com/d/msgid/sage-devel/482adb67-c5ee-4eeb-97f0-c0f9dec26cc6n%40googlegroups.com. -- You received this message because you are subscribed to the Google Groups "sage-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To view this discussion visit https://groups.google.com/d/msgid/sage-devel/7F90292C-EA71-46A4-927A-83DA05E7A979%40gmail.com.
