Hi All, I am trying to install rpy2 (2.2.6) on mac os x 10.6.8 with python 2.7 and R 2.14.1. I think all my env variables are correct but I still get the underlying error. I think I previously solved it by forcing it to compile with arch x86_64 - but I can't remember what I did. Can anyone help?
Thanks, Yair ~$ easy_install rpy2 Searching for rpy2 Reading http://pypi.python.org/simple/rpy2/ Reading http://rpy.sourceforge.net Best match: rpy2 2.2.6 Downloading http://pypi.python.org/packages/source/r/rpy2/rpy2-2.2.6.tar.gz#md5=32d73a3e4acb915ce15d958c9092dcb8 Processing rpy2-2.2.6.tar.gz Writing /var/folders/HU/HUM+PVEdFU8FgIU8u5qB+k+++TI/-Tmp-/easy_install-UIkMqK/rpy2-2.2.6/setup.cfg Running rpy2-2.2.6/setup.py -q bdist_egg --dist-dir /var/folders/HU/HUM+PVEdFU8FgIU8u5qB+k+++TI/-Tmp-/easy_install-UIkMqK/rpy2-2.2.6/egg-dist-tmp-G4GNIC Configuration for R as a library: include_dirs: ('/Library/Frameworks/R.framework/Resources/include', '/Library/Frameworks/R.framework/Resources/include/x86_64') libraries: ('Rblas', 'Rlapack') library_dirs: ('/Library/Frameworks/R.framework/Resources/lib/x86_64',) extra_link_args: ('-framework R', '-F/Library/Frameworks/R.framework/..') # OSX-specific (included in extra_link_args) framework_dirs: ('-F/Library/Frameworks/R.framework/..',) frameworks: ('-framework R',) warning: no previously-included files matching '*patch*' found anywhere in distribution warning: no previously-included files matching '*diff*' found anywhere in distribution warning: no previously-included files matching '.hg' found anywhere in distribution no previously-included directories found matching 'dist' In file included from ./rpy/rinterface/_rinterface.c:63: /Library/Frameworks/R.framework/Resources/include/Rinternals.h:657: warning: function declaration isn’t a prototype In file included from ./rpy/rinterface/_rinterface.c:79: /Library/Frameworks/R.framework/Resources/include/R_ext/Rdynload.h:26: warning: function declaration isn’t a prototype In file included from ./rpy/rinterface/_rinterface.c:132: ./rpy/rinterface/sequence.c: In function ‘VectorSexp_ass_slice’: ./rpy/rinterface/sequence.c:542: warning: unused variable ‘sexp_item’ ./rpy/rinterface/sequence.c:542: warning: unused variable ‘tmp’ ./rpy/rinterface/sequence.c:541: warning: unused variable ‘vs’ ./rpy/rinterface/sequence.c:478: warning: unused variable ‘self_typeof’ ./rpy/rinterface/_rinterface.c: At top level: ./rpy/rinterface/sequence.c:2173: warning: ‘ComplexVectorSexp_AsSexp’ defined but not used ./rpy/rinterface/_rinterface.c: In function ‘EmbeddedR_ShowFiles’: ./rpy/rinterface/_rinterface.c:748: warning: ‘gstate’ may be used uninitialized in this function ./rpy/rinterface/_rinterface.c: In function ‘EmbeddedR_FlushConsole’: ./rpy/rinterface/_rinterface.c:602: warning: ‘gstate’ may be used uninitialized in this function ./rpy/rinterface/_rinterface.c: In function ‘EmbeddedR_ReadConsole’: ./rpy/rinterface/_rinterface.c:470: warning: ‘gstate’ may be used uninitialized in this function ./rpy/rinterface/_rinterface.c: In function ‘EmbeddedR_WriteConsole’: ./rpy/rinterface/_rinterface.c:328: warning: ‘gstate’ may be used uninitialized in this function ./rpy/rinterface/_rinterface.c: In function ‘EmbeddedR_ShowMessage’: ./rpy/rinterface/_rinterface.c:402: warning: ‘gstate’ may be used uninitialized in this function ./rpy/rinterface/_rinterface.c: In function ‘EmbeddedR_CleanUp’: ./rpy/rinterface/_rinterface.c:896: warning: ‘gstate’ may be used uninitialized in this function ./rpy/rinterface/_rinterface.c: In function ‘EmbeddedR_ChooseFile’: ./rpy/rinterface/_rinterface.c:646: warning: ‘gstate’ may be used uninitialized in this function In file included from /Library/Frameworks/R.framework/Resources/include/R.h:34, from ./rpy/rinterface/_rinterface.c:61: /Library/Frameworks/R.framework/Resources/include/Rconfig.h:5:25: error: ppc/Rconfig.h: No such file or directory In file included from ./rpy/rinterface/_rinterface.c:62: /Library/Frameworks/R.framework/Resources/include/Rversion.h:5:26: error: ppc/Rversion.h: No such file or directory In file included from ./rpy/rinterface/_rinterface.c:63: /Library/Frameworks/R.framework/Resources/include/Rinternals.h:657: warning: function declaration isn’t a prototype In file included from ./rpy/rinterface/_rinterface.c:79: /Library/Frameworks/R.framework/Resources/include/R_ext/Rdynload.h:26: warning: function declaration isn’t a prototype In file included from ./rpy/rinterface/_rinterface.c:110: ./rpy/rinterface/r_utils.h:13: error: ‘R_MAJOR’ undeclared here (not in a function) ./rpy/rinterface/r_utils.h:13: error: ‘R_MINOR’ undeclared here (not in a function) ./rpy/rinterface/r_utils.h:13: error: ‘R_STATUS’ undeclared here (not in a function) ./rpy/rinterface/r_utils.h:14: error: ‘R_SVN_REVISION’ undeclared here (not in a function) In file included from ./rpy/rinterface/_rinterface.c:132: ./rpy/rinterface/sequence.c: In function ‘VectorSexp_ass_slice’: ./rpy/rinterface/sequence.c:542: warning: unused variable ‘sexp_item’ ./rpy/rinterface/sequence.c:542: warning: unused variable ‘tmp’ ./rpy/rinterface/sequence.c:541: warning: unused variable ‘vs’ ./rpy/rinterface/sequence.c:478: warning: unused variable ‘self_typeof’ In file included from ./rpy/rinterface/_rinterface.c:63: /Library/Frameworks/R.framework/Resources/include/Rinternals.h:657: warning: function declaration isn’t a prototype In file included from ./rpy/rinterface/_rinterface.c:79: /Library/Frameworks/R.framework/Resources/include/R_ext/Rdynload.h:26: warning: function declaration isn’t a prototype In file included from ./rpy/rinterface/_rinterface.c:132: ./rpy/rinterface/sequence.c: In function ‘VectorSexp_ass_slice’: ./rpy/rinterface/sequence.c:542: warning: unused variable ‘sexp_item’ ./rpy/rinterface/sequence.c:542: warning: unused variable ‘tmp’ ./rpy/rinterface/sequence.c:541: warning: unused variable ‘vs’ ./rpy/rinterface/sequence.c:478: warning: unused variable ‘self_typeof’ ./rpy/rinterface/_rinterface.c: At top level: ./rpy/rinterface/sequence.c:2173: warning: ‘ComplexVectorSexp_AsSexp’ defined but not used ./rpy/rinterface/_rinterface.c: In function ‘EmbeddedR_ShowFiles’: ./rpy/rinterface/_rinterface.c:748: warning: ‘gstate’ may be used uninitialized in this function ./rpy/rinterface/_rinterface.c: In function ‘EmbeddedR_FlushConsole’: ./rpy/rinterface/_rinterface.c:602: warning: ‘gstate’ may be used uninitialized in this function ./rpy/rinterface/_rinterface.c: In function ‘EmbeddedR_ReadConsole’: ./rpy/rinterface/_rinterface.c:470: warning: ‘gstate’ may be used uninitialized in this function ./rpy/rinterface/_rinterface.c: In function ‘EmbeddedR_WriteConsole’: ./rpy/rinterface/_rinterface.c:328: warning: ‘gstate’ may be used uninitialized in this function ./rpy/rinterface/_rinterface.c: In function ‘EmbeddedR_ShowMessage’: ./rpy/rinterface/_rinterface.c:402: warning: ‘gstate’ may be used uninitialized in this function ./rpy/rinterface/_rinterface.c: In function ‘EmbeddedR_CleanUp’: ./rpy/rinterface/_rinterface.c:896: warning: ‘gstate’ may be used uninitialized in this function ./rpy/rinterface/_rinterface.c: In function ‘EmbeddedR_ChooseFile’: ./rpy/rinterface/_rinterface.c:646: warning: ‘gstate’ may be used uninitialized in this function lipo: can't open input file: /var/folders/HU/HUM+PVEdFU8FgIU8u5qB+k+++TI/-Tmp-//cclnDZS2.out (No such file or directory) error: Setup script exited with error: command 'gcc-4.2' failed with exit status 1 ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. 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