Hello... For your information: I am working with R version 2.13.1 (2011-07-08)
Anyway I found a hint in the internet at (http://code.google.com/p/pyrit/issues/detail?id=337) and tried to build and install with: env ARCHFLAGS="-arch i386 -arch x86_64" python setup.py build install It seems that works! I tried the mentioned tests and here the output: >>> import rpy2.tests >>> import unitest Traceback (most recent call last): File "<stdin>", line 1, in <module> ImportError: No module named unitest >>> import unittest >>> tr = unittest.TextTestRunner(verbosity = 1) >>> suite = rpy2.tests.suite() >>> tr.run(suite) ...................................................................................................................................................................................................................................................................................................................................... ---------------------------------------------------------------------- Ran 326 tests in 4.117s OK <unittest._TextTestResult run=326 errors=0 failures=0> So is now everything correctly installed? And will it work now? Thank you very much! /Johannes -------- Original-Nachricht -------- > Datum: Wed, 19 Oct 2011 09:21:13 +0200 > Von: Laurent Gautier <lgaut...@gmail.com> > An: Johannes Radinger <jradin...@gmx.at> > CC: "RPy help, support and design discussion list" > <rpy-list@lists.sourceforge.net> > Betreff: Re: [Rpy] fail install on Mac OS X 10.6.8 > With a new version of gcc, the outcome should at least a bit different > (even > if on the version number in the console output). > Did you mention the version of R you are trying to build against ? > On Oct 19, 2011 6:10 AM, "Johannes Radinger" <jradin...@gmx.at> wrote: > > > Hello again, > > > > I checked my GCC version on my Mac again and it is: > > i686-apple-darwin10-gcc-4.2.1 (GCC) 4.2.1 And that > > is the most up tp date version for my operating system. > > > > I tried also to install rpy2 via easy_install but encounter > > the same error. > > > > So what to do? > > I found following page. Maybe that is a hint to the solution, > > but I am not sure what I should do in my case: > > > > > http://stackoverflow.com/questions/2211387/python-build-problem-on-mac-os-10-6-snow-leopard > > > > /johannes > > > > > > > > > > Am 18.10.2011 um 23:01 schrieb Laurent Gautier: > > > > Wouldn't the following line provide a hint about where the problem is ? > > > > /usr/include/AvailabilityMacros.h:108:14: warning: #warning Building for > > Intel with Mac OS X Deployment Target < 10.4 is invalid. > > > > > > Wasn't GCC4.0 the default compiler on Mac OS X 10.4 ? > > > > > > On 2011-10-18 22:34, Johannes Radinger wrote: > > > > Hello, > > > > I am very new to rpy and I just wanted > > to install the rpy2 package on my Mac OS X 10.6.8 > > with the python setup.py build install but I fail. > > > > You can see the error-message below! > > It seems that the gcc-4.0 failed with exit status 1, for > > whatever that means. As I am still very new > > to python and compiling etc. I don't know how to > > handle this error... What should I do? What > > should I check? > > > > Thank you very much > > > > /Johannes > > > > noname:rpy2-2.2.1 admin$ python setup.py build install > > running build > > running build_py > > running build_ext > > Configuration for R as a library: > > include_dirs: ('/Library/Frameworks/R.framework/Resources/include', > > '/Library/Frameworks/R.framework/Resources/include/x86_64') > > libraries: ('Rblas', 'Rlapack') > > library_dirs: > ('/Library/Frameworks/R.framework/Resources/lib/x86_64',) > > extra_link_args: ('-framework R', > '-F/Library/Frameworks/R.framework/..') > > # OSX-specific (included in extra_link_args) > > framework_dirs: ('-F/Library/Frameworks/R.framework/..',) > > frameworks: ('-framework R',) > > building 'rpy2.rinterface._rinterface' extension > > gcc-4.0 -fno-strict-aliasing -fno-common -dynamic -arch ppc -arch i386 > -g > > -O2 -DNDEBUG -g -O3 -DR_INTERFACE_PTRS=1 -DHAVE_POSIX_SIGJMP=1 > > -DCSTACK_DEFNS=1 -DRIF_HAS_RSIGHAND=1 -I./rpy/rinterface > > -I/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6 > > -I/Library/Frameworks/R.framework/Resources/include > > -I/Library/Frameworks/R.framework/Resources/include/x86_64 -c > > ./rpy/rinterface/_rinterface.c -o > > build/temp.macosx-10.3-fat-2.6/./rpy/rinterface/_rinterface.o > > In file included from /usr/include/architecture/i386/math.h:626, > > from /usr/include/math.h:28, > > from > > > /Library/Frameworks/Python.framework/Versions/2.6/include/python2.6/pyport.h:235, > > from > > > /Library/Frameworks/Python.framework/Versions/2.6/include/python2.6/Python.h:58, > > from ./rpy/rinterface/_rinterface.c:55: > > /usr/include/AvailabilityMacros.h:108:14: warning: #warning Building for > > Intel with Mac OS X Deployment Target < 10.4 is invalid. > > In file included from > > /Library/Frameworks/R.framework/Resources/include/R.h:34, > > from ./rpy/rinterface/_rinterface.c:61: > > /Library/Frameworks/R.framework/Resources/include/Rconfig.h:5:25: error: > > ppc/Rconfig.h: No such file or directory > > In file included from ./rpy/rinterface/_rinterface.c:62: > > /Library/Frameworks/R.framework/Resources/include/Rversion.h:5:26: > error: > > ppc/Rversion.h: No such file or directory > > In file included from ./rpy/rinterface/_rinterface.c:100: > > ./rpy/rinterface/r_utils.h:13: error: ‚ÄòR_MAJOR‚Äô undeclared > here (not in > > a function) > > ./rpy/rinterface/r_utils.h:13: error: ‚ÄòR_MINOR‚Äô undeclared > here (not in > > a function) > > ./rpy/rinterface/r_utils.h:13: error: ‚ÄòR_STATUS‚Äô undeclared > here (not > > in a function) > > ./rpy/rinterface/r_utils.h:14: error: ‚ÄòR_SVN_REVISION‚Äô > undeclared here > > (not in a function) > > lipo: can't figure out the architecture type of: /var/tmp//ccPk52r1.out > > error: command 'gcc-4.0' failed with exit status 1 > > > > > > > > > ------------------------------------------------------------------------------ > > All the data continuously generated in your IT infrastructure contains a > > definitive record of customers, application performance, security > > threats, fraudulent activity and more. Splunk takes this data and makes > > sense of it. Business sense. IT sense. Common > sense.http://p.sf.net/sfu/splunk-d2d-oct > > > > > > > > _______________________________________________ > > rpy-list mailing > listrpy-list@lists.sourceforge.nethttps://lists.sourceforge.net/lists/listinfo/rpy-list > > > > > > > > -- NEU: FreePhone - 0ct/min Handyspartarif mit Geld-zurück-Garantie! Jetzt informieren: http://www.gmx.net/de/go/freephone ------------------------------------------------------------------------------ All the data continuously generated in your IT infrastructure contains a definitive record of customers, application performance, security threats, fraudulent activity and more. Splunk takes this data and makes sense of it. Business sense. IT sense. Common sense. http://p.sf.net/sfu/splunk-d2d-oct _______________________________________________ rpy-list mailing list rpy-list@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rpy-list
