On Fri, Apr 15, 2011 at 4:56 PM, Anamaria Crisan <a...@genomedx.com> wrote: > I am using just Rpy. Would RPy2 be the solution? >
Possibly - and in the long term it would be worth looking at, but there are quite a few API changes to beware of. Back in rpy (v1), to run an R command like: cindex(x=prob, surv.time=survTIME, surv.even=survEVENT) you should (as I recall) switch the dots to underscores in Python for argument names etc: cindex(x=prob, surv_time=survTIME, surv_even=survEVENT) This is because dots are used in Python to access the methods and attributes of an object. Argument names can't have dots, that is what the SyntaxError is trying to tell you. The fact you then get an "not all arguments have the same length" suggests there is a secondary problem in your script. I'm not familiar with the R package survcomp so I can't really guess. Peter ------------------------------------------------------------------------------ Benefiting from Server Virtualization: Beyond Initial Workload Consolidation -- Increasing the use of server virtualization is a top priority.Virtualization can reduce costs, simplify management, and improve application availability and disaster protection. Learn more about boosting the value of server virtualization. http://p.sf.net/sfu/vmware-sfdev2dev _______________________________________________ rpy-list mailing list rpy-list@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rpy-list
