Support Requests item #2821065, was opened at 2009-07-13 23:16 Message generated for change (Tracker Item Submitted) made by mamoll You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=453022&aid=2821065&group_id=48422
Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Install Problem (example) Group: None Status: Open Priority: 5 Private: No Submitted By: Mark Moll (mamoll) Assigned to: Nobody/Anonymous (nobody) Summary: installing RPy on OS X with deps satisfied through MacPorts Initial Comment: I have R and python2.6 installed through MacPorts. When I run "python setup.py build" in the rpy2-2.0.6 directory, I get the following error: creating build/temp.macosx-10.5-i386-2.6/rpy/rinterface /usr/bin/gcc-4.0 -fno-strict-aliasing -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -DR_INTERFACE_PTRS=1 -DCSTACK_DEFNS=1 -DRIF_HAS_RSIGHAND=1 -I/opt/local/lib/R/include -Irpy/rinterface -I/opt/local/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6 -c rpy/rinterface/array.c -o build/temp.macosx-10.5-i386-2.6/rpy/rinterface/array.o /usr/bin/gcc-4.0 -fno-strict-aliasing -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -DR_INTERFACE_PTRS=1 -DCSTACK_DEFNS=1 -DRIF_HAS_RSIGHAND=1 -I/opt/local/lib/R/include -Irpy/rinterface -I/opt/local/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6 -c rpy/rinterface/r_utils.c -o build/temp.macosx-10.5-i386-2.6/rpy/rinterface/r_utils.o /usr/bin/gcc-4.0 -fno-strict-aliasing -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -DR_INTERFACE_PTRS=1 -DCSTACK_DEFNS=1 -DRIF_HAS_RSIGHAND=1 -I/opt/local/lib/R/include -Irpy/rinterface -I/opt/local/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6 -c rpy/rinterface/rinterface.c -o build/temp.macosx-10.5-i386-2.6/rpy/rinterface/rinterface.o In file included from rpy/rinterface/rinterface.c:69: /opt/local/lib/R/include/R_ext/Rdynload.h:26: warning: function declaration isn’t a prototype rpy/rinterface/rinterface.c:104: warning: ‘interrupt_R’ defined but not used rpy/rinterface/rinterface.c:2676: warning: ‘externalMethods’ defined but not used /usr/bin/gcc-4.0 -L/opt/local/lib -bundle -undefined dynamic_lookup build/temp.macosx-10.5-i386-2.6/rpy/rinterface/array.o build/temp.macosx-10.5-i386-2.6/rpy/rinterface/r_utils.o build/temp.macosx-10.5-i386-2.6/rpy/rinterface/rinterface.o -L/opt/local/lib/R/lib -L/opt/local/lib/R/modules -L/opt/local/lib/R/lib -L/opt/local/lib/R/modules -lR -o build/lib.macosx-10.5-i386-2.6/rpy2/rinterface/rinterface.so -L/opt/local/lib/R/lib -lR -dylib_file libRblas.dylib:/opt/local/lib/R/lib/libRblas.dylib -L/opt/local/lib/R/lib -lRlapack -L/opt/local/lib/R/lib -lRblas ld: library not found for -lR -dylib_file libRblas.dylib:/opt/local/lib/R/lib/libRblas.dylib collect2: ld returned 1 exit status error: command '/usr/bin/gcc-4.0' failed with exit status 1 If I copy/paste the last gcc command on the command line I do *not* get an error. How could this be? ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=453022&aid=2821065&group_id=48422 ------------------------------------------------------------------------------ Enter the BlackBerry Developer Challenge This is your chance to win up to $100,000 in prizes! For a limited time, vendors submitting new applications to BlackBerry App World(TM) will have the opportunity to enter the BlackBerry Developer Challenge. See full prize details at: http://p.sf.net/sfu/Challenge _______________________________________________ rpy-list mailing list rpy-list@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rpy-list
