Typing R RHOME gave me
/usr/local/lib/R
which is the correct installation directory. Thanks a lot for your time
helping me out by the way,
Andrew
On 11/5/07, Gregory Warnes <[EMAIL PROTECTED]> wrote:
>
>
> What do you get when you type
>
> R RHOME
>
> on the command line?
>
> -G
>
> On Nov 5, 2007, at 11:01AM , Andrew Jones wrote:
>
> I don't get any error messages when I start up R by itself. And methods
> and grDevices are both listed when I do the library() command. I don't
> actually use R independently of rpy, so I'm not sure of how to test that
> they are working correctly other than that. Is there something I can run to
> test it?
>
> On 11/5/07, Gregory Warnes <[EMAIL PROTECTED]> wrote:
> >
> >
> > These messages are generated by the R shared library as it attempts
> > to load the fundimental R packages it needs. This usually means
> > that your installation of R is lacking properly installed versions of
> > these packages. Does R start up and run properly when run directly?
> >
> > -G
> >
> >
> > On Nov 2, 2007, at 3:56PM , Andrew Jones wrote:
> >
> > > When I try to import rpy I get the following messages:
> > >
> > > Python 2.4.4 (#9, Oct 30 2007, 15:13:19)
> > > [GCC 4.1.0 20060304 (Red Hat 4.1.0-3)] on linux2
> > > Type "help", "copyright", "credits" or "license" for more information.
> > > >>> import rpy
> > > RHOME= /usr/local/lib/R
> > > RVERSION= 2.6.0
> > > RVER= 2060
> > > RUSER= /home/emu/ajones
> > > Loading Rpy version 2060 ..Error in dyn.load(file, ...) :
> > > unable to load shared library '/usr/local/lib/R/library/methods/
> > > libs/methods.so':
> > > /usr/local/lib/R/library/methods/libs/methods.so: undefined
> > > symbol: Rf_allocS4Object
> > > Error in dyn.load(file, ...) :
> > > unable to load shared library '/usr/local/lib/R/library/grDevices/
> > > libs/grDevices.so':
> > > /usr/local/lib/R/library/grDevices/libs/grDevices.so: undefined
> > > symbol: utf8locale
> > > In addition: Warning message:
> > > package "methods" in options("defaultPackages") was not found
> > > Error in dyn.load (file, ...) :
> > > unable to load shared library '/usr/local/lib/R/library/grDevices/
> > > libs/grDevices.so':
> > > /usr/local/lib/R/library/grDevices/libs/grDevices.so: undefined
> > > symbol: utf8locale
> > > In addition: Warning message:
> > > package grDevices in options("defaultPackages") was not found
> > > Error in dyn.load(file, ...) :
> > > unable to load shared library '/usr/local/lib/R/library/grDevices/
> > > libs/grDevices.so':
> > > /usr/local/lib/R/library/grDevices/libs/grDevices.so: undefined
> > > symbol: utf8locale
> > > In addition: Warning message:
> > > package graphics in options("defaultPackages") was not found
> > > Error in dyn.load(file, ...) :
> > > unable to load shared library '/usr/local/lib/R/library/methods/
> > > libs/methods.so':
> > > /usr/local/lib/R/library/methods/libs/methods.so: undefined
> > > symbol: Rf_allocS4Object
> > > In addition: Warning message:
> > > package stats in options("defaultPackages") was not found
> > > During startup - Warning message:
> > > package methods in options("defaultPackages") was not found
> > > Done.
> > > Creating the R object 'r' .. Done
> > >
> > >
> > > I'm using R version 2.6.0 and rpy version 1.0RC3. I'm running
> > > fedora core 5. I compiled R with the --enable-R-shlib --enable-
> > > BLAS-shlib flags. I've tried removing R and rpy and recompiling
> > > both into a fresh install. I've also checked to make sure there
> > > wasn't an alternate version of R installed that would be confusing
> > > things. Is there something I am doing wrong? Any help would be
> > > appreciated. Thanks,
> > >
> > > Andrew
> > >
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