Are these "flavored" comments appropriate for scientific discussion?

Peter ZavalijĀ 


-----Original Message-----
From: Smirnova Olga [mailto:olga.smirn...@hw7.ecs.kyoto-u.ac.jp] 
Sent: Sunday, March 08, 2009 5:58 AM
To: Brian H. Toby; rietveld_l@ill.fr
Subject: Re: background subtraction R values

>> The unweighted r-factor is pretty much meaningless, so again who cares?
A mean deviance (just the sum of deviances divided per the number of points)
divided per mean peak intensity (or highest peak) might be an alternative to
R factor, perhaps. 

I do not have practical experience with xye input, and I was confused
(because the bad russian word is not to be pronounced in the presence of a
lady, in particular a little one). I forgot an attachment because it is in
electrochemistry field, but I attach it now; it is weighted enough to become
not only a Chair of Electrochemistry Dep, but a head of an Institute. Sorry
it went wrongly.
 
----- Original Message -----
>> From: "Brian H. Toby" <brian.t...@anl.gov>
>> To: rietveld_l@ill.fr
>> Date: 2009-03-07 04:55:56
>> Subject: background subtraction R values
>> 
>> I am not sure what all the fuss on background subtraction is all 
>> about, as long as the uncertainties in the data are unchanged. We 
>> have to model background in all powder methods and add it to the 
>> computed pattern. If you subtract something from the obs pattern 
>> before you fit, the only things that changes is the normalization 
>> term in the R factors. Since the purpose of the weighted R-factor is 
>> to measure the quality of different models to the same data, this 
>> really makes no difference. The unweighted r-factor is pretty much 
>> meaningless, so again who cares?
>> 
>> I don't love the idea of modifying data, rather than applying a 
>> correction to a calculated value -- observations should be 
>> sacrosanct, IMHO, but having said that, more than once have I applied 
>> an absorption correction directly to measured intensities.
>> 
>> The important point is that if you measure 100 counts at a point, the 
>> uncertainty in that is 10. If you decide that 95 of those counts are 
>> background, go ahead and subtract them if you must, but the 
>> uncertainty on the observation remains 10, and does not drop to sqrt
>> (5) -- this means you must compute uncertainties before subtracting 
>> and use a Rietveld code that will accept "xye" input, as Pam pointed 
>> out.
>> 
>> Brian
>> 
>> ********************************************************************
>> Brian H. Toby, Ph.D.                            office: 630-252-5488
>> Senior Physicist/Materials Characterization Group Leader Advanced 
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>> 
>> 
>> 


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