Hi, Greg, That fails for me because it requires rdkit 3.4 at minimum.
Earlier, I installed 3.1 using conda. There doesn't appear to be a way to install 3.4 using conda. (I tried the default anaconda and also "-c grelandrum".) -P. On Mon, Aug 29, 2016 at 10:55 PM, Greg Landrum <[email protected]> wrote: > Sorry about that. The command I sent was wrong, and I had made a mistake > when I uploaded the file. > > Please try this one: > conda install -c greglandrum rdkit-postgresql95 > > -greg > > > On Mon, Aug 29, 2016 at 10:47 PM, Peter S. Shenkin <[email protected]> > wrote: > >> Hi, Greg, >> >> Thanks. I tried your invocation, but conda cannot find the package: >> >> (rdk0) > conda install -c https://conda.anaconda.org/greglandrum >> rdkit-postgresql95 2>&1 | tee install_rdkit-postresql_fr_greglandrum.log >> >> Fetching package metadata ......... >> Solving package specifications: . >> Error: Package missing in current osx-64 channels: >> - rdkit-postgresql95 >> >> Close matches found; did you mean one of these? >> rdkit-postgresql95: postgresql >> >> You can search for packages on anaconda.org with >> anaconda search -t conda rdkit-postgresql95 >> >> On Mon, Aug 29, 2016 at 2:52 AM, Greg Landrum <[email protected]> >> wrote: >> >>> Hi Peter, >>> >>> Thanks for pointing out the conda postgresql build; it's great that they >>> are providing this now (though it's a bit irritating that it doesn't have >>> readline support). I was able to do a Mac build of the RDKit cartridge >>> against that postgresql install this morning. >>> >>> Since this uses a different set of dependencies, I'm not comfortable >>> pushing this to the main rdkit channel until after Riccardo and I have had >>> a chance to talk about how we want to handle PostgreSQL going forward. In >>> the meantime there is a Mac build in my channel at anaconda.org. It >>> would be great if you could try this out and let me know if it works for >>> you: >>> conda install -c https://conda.anaconda.org/greglandrum >>> rdkit-postgresql95 >>> >>> Best, >>> -greg >>> >>> >>> On Sat, Aug 27, 2016 at 7:49 AM, Peter S. Shenkin <[email protected]> >>> wrote: >>> >>>> Thanks, Greg. I assumed that because the installation manager gave a >>>> conda invocation for rdkit-postgresql, it must exist. Perhaps a bad >>>> assumption, but that's why I guessed that it's just not been ported to OS >>>> X. >>>> >>>> FWIW, there is a conda build of PostgreSQL, called "postgresql". >>>> >>>> Thanks again, >>>> -P. >>>> >>>> -P. >>>> >>>> On Sat, Aug 27, 2016 at 12:56 AM, Greg Landrum <[email protected]> >>>> wrote: >>>> >>>>> There just isn't a conda build (yet) for the cartridge (or, I believe, >>>>> for PostgreSQL itself). >>>>> >>>>> I did a bit of looking this morning and it is going to require some >>>>> work to get things working. >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> On Sat, Aug 27, 2016 at 6:25 AM +0200, "Peter S. Shenkin" < >>>>> [email protected]> wrote: >>>>> >>>>> Well, actually, thought I'd try the conda install of rdkit-postgresql, >>>>>> using: >>>>>> >>>>>> conda install -c https://conda.binstar.org/rdkit rdkit-postgresql >>>>>> >>>>>> I get the message: >>>>>> >>>>>> Error: Package missing in current osx-64 channels: >>>>>> - rdkit-postgresql >>>>>> Close matches found; did you mean one of these? >>>>>> rdkit-postgresql: postgresql >>>>>> >>>>>> >>>>>> Is the cartridge not supported on OS X? >>>>>> >>>>>> -P. >>>>>> >>>>>> On Sat, Aug 27, 2016 at 12:10 AM, Greg Landrum < >>>>>> [email protected]> wrote: >>>>>> >>>>>>> >>>>>>> >>>>>>> On Sat, Aug 27, 2016 at 5:23 AM, Peter S. Shenkin <[email protected] >>>>>>> > wrote: >>>>>>> >>>>>>>> >>>>>>>> Lazy execution rules. >>>>>>>> >>>>>>> >>>>>>> :-) >>>>>>> >>>>>> >>>>>> >>>> >>> >> >
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