Dear Colleagues, Does anyone know what is the difference between ape’s branching.times() and laser’s getBtimes()? And why they may be giving rather different results, particularly for internal branches? (From an ultrametric tree created by chronotree <- chronos(tree, lambda = 1, model = "correlated", quiet = FALSE, calibration = makeChronosCalib(tree), control = chronos.control())
Thank you very much in advance for your help! PS. A related but less important question: I am curious how does branching.times() calculate branching times from a non-ultrametric tree? -- Lev Yampolsky Professor Department of Biological Sciences East Tennessee State University Box 70703 Johnson City TN 37614-1710 Cell 423-676-7489 Office/lab 423-439-4359 Fax 423-439-5958 _______________________________________________ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/
