Hi, Thanks for the advice.
Still not 100% sure if that is okay to submit to CRAN. As mentioned I have new packages that have others in the suggest (and yes the examples/tests run fine by making the dependent), But if I have a package that is not yet on CRAN in the suggest I see that running winbuilder. Suggests or Enhances not in mainstream repositories: dartR.sim * checking package namespace information ... OK * checking package dependencies ... NOTE Package suggested but not available for checking: 'dartR.sim' Can I explain when I submit that dartR.sim will be there (as mentioned the examples run fine), but obviously is not yet on CRAN. I assume the same would happen if I put the new packages in Enhances… Regards, Bernd From: Thierry Onkelinx <thierry.onkel...@inbo.be> Sent: Friday, June 23, 2023 5:51 PM To: Simon Urbanek <simon.urba...@r-project.org> Cc: Bernd.Gruber <bernd.gru...@canberra.edu.au>; r-package-devel@r-project.org Subject: Re: [R-pkg-devel] Questions regarding a new (seperated package) and how to submit them to cran Dear Bernd, You could contact the maintainer of the spatstat package. They did the same thing (splitting a large package into several smaller ones) a few years ago. Having the base package suggesting an add-on and the add-on depending on or suggesting the base package might create an unwanted loop. Best regards, ir. Thierry Onkelinx Statisticus / Statistician Vlaamse Overheid / Government of Flanders INSTITUUT VOOR NATUUR- EN BOSONDERZOEK / RESEARCH INSTITUTE FOR NATURE AND FOREST Team Biometrie & Kwaliteitszorg / Team Biometrics & Quality Assurance thierry.onkel...@inbo.be<mailto:thierry.onkel...@inbo.be> Havenlaan 88 bus 73, 1000 Brussel www.inbo.be<http://www.inbo.be> /////////////////////////////////////////////////////////////////////////////////////////// To call in the statistician after the experiment is done may be no more than asking him to perform a post-mortem examination: he may be able to say what the experiment died of. ~ Sir Ronald Aylmer Fisher The plural of anecdote is not data. ~ Roger Brinner The combination of some data and an aching desire for an answer does not ensure that a reasonable answer can be extracted from a given body of data. ~ John Tukey /////////////////////////////////////////////////////////////////////////////////////////// [https://inbo-website-prd-532750756126.s3-eu-west-1.amazonaws.com/inbologoleeuw_nl.png]<https://www.inbo.be> Op vr 23 jun 2023 om 06:52 schreef Simon Urbanek <simon.urba...@r-project.org<mailto:simon.urba...@r-project.org>>: Bernd, the sequence in which you submit doesn't matter - the packages have to work regardless of the sequence. Suggests means that the dependency is optional, not that it can break tests. You have to skip the tests that cannot be run due to missing dependencies (see 1.1.3.1<http://1.1.3.1> in R-exts) Cheers, Simon > On Jun 23, 2023, at 2:35 PM, Bernd.Gruber > <bernd.gru...@canberra.edu.au<mailto:bernd.gru...@canberra.edu.au>> wrote: > > Hi, > > I have a question regarding the separation of a package into smaller pieces > (to avoid long testing/installation times and more important to avoid to many > dependencies) > > I am the maintainer of an R package (dartR) which has grown and is now at the > limit in terms of testing/run time and also dependencies. To further develop > the package we started to break the package into smaller packages namely > > > Two core packages (dartR.base and dartR.data) and here dartR.base has > dartR.data in the depends. (dartR.base is 60% of the previous package) and > dartR.data is our data.package for test data (dartR.data is already on CRAN) > > > > > Next to the two core packages we also have 3 more addon packages that deal > with specialised analysis > > dartR.sim > dartR.spatial > dartR.popgenomics. > > Those packages depend on dartR.base and dartR.data. > > All addon packages and core packages should have the other addon packages as > suggests, hence here comes the question. > > > How do I submit the packages? All of them at once? Or step by step. > > If I submit step by step (e.g. dartR.base) it obviously cannot have the other > dartR addon packages as suggests (cannot be tested and will break the CRAN > tests). > > So would be the correct way to: > Submit dartR.base (without dartR.sim, dartR.spatial and dartR.popgenomics in > the suggest.) > Then submit dartR.sim, then dartR.spatial and finally dartR.popgenomics (all > without suggests of the other packages) > > And finally update all packages (only their description file and add the > suggests once they are on CRAN). > > Hope that makes sense and thanks in advance, > > Bernd > ______________________________________________ R-package-devel@r-project.org<mailto:R-package-devel@r-project.org> mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel<https://stat.ethz.ch/mailman/listinfo/r-package-devel> [[alternative HTML version deleted]] ______________________________________________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
