Installing from the URL you provide, as well as doing R CMD build HACSim as suggested by @JeffNewmiller fails.
When trying the latter solution, I get the same error as the one provided in my original post. Any thoughts? On Tue, May 16, 2023 at 12:52 PM Jarrett Phillips < phillipsjarre...@gmail.com> wrote: > Hi Duncan, > > I actually installed gfortran from > > https://github.com/fxcoudert/gfortran-for-macOS/releases > > but I can instead install from the URL you provide. > > Hopefully this fixes the problem. > > I will respond here if there are still issues. > > Thanks. > > Cheers, > > Jarrett > > > On Tue, May 16, 2023 at 12:39 PM Duncan Murdoch <murdoch.dun...@gmail.com> > wrote: > >> On 16/05/2023 12:07 p.m., Jarrett Phillips wrote: >> > Hi All, >> > >> > I'm trying to generate a `tar.gz` file on a Mac for R package >> submission to >> > CRAN but am having issues. >> > >> > I'm using `devtools`, specifically `build()` and `install()`. >> > >> > My package relies on compiled code via `Rcpp/RcppArmadillo`. >> > >> > build("HACSim_OO") >> > ── R CMD build >> > ───────────────────────────────────────────────────────────────── >> > ✔ checking for file ‘/Users/jarrettphillips/Desktop/HAC >> > simulation/HACSim_OO/DESCRIPTION’ ... >> > ─ preparing ‘HACSim’: >> > ✔ checking DESCRIPTION meta-information ... >> > ─ cleaning src >> > ─ installing the package to process help pages >> > ----------------------------------- >> > ─ installing *source* package ‘HACSim’ ... >> > ** using staged installation >> > ** libs >> > clang++ -arch arm64 -std=gnu++11 - >> > I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG >> > >> >> -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/Rcpp/include' >> > >> -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/RcppArmadillo/include' >> > -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 >> -Wall >> > -pedantic -fdiagnostics-color=always -c RcppExports.cpp -o RcppExports.o >> > clang++ -arch arm64 -std=gnu++11 >> > -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG >> > >> >> -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/Rcpp/include' >> > >> -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/RcppArmadillo/include' >> > -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 >> -Wall >> > -pedantic -fdiagnostics-color=always -c accumulate.cpp -o accumulate.o >> > clang++ -arch arm64 -std=gnu++11 -dynamiclib >> > -Wl,-headerpad_max_install_names -undefined dynamic_lookup >> -single_module >> > -multiply_defined suppress >> -L/Library/Frameworks/R.framework/Resources/lib >> > -L/opt/R/arm64/lib -o HACSim.so RcppExports.o accumulate.o >> > -L/Library/Frameworks/R.framework/Resources/lib -lRlapack >> > -L/Library/Frameworks/R.framework/Resources/lib -lRblas >> > -L/opt/R/arm64/gfortran/lib/gcc/aarch64-apple-darwin20.6.0/12.0.1 >> > -L/opt/R/arm64/gfortran/lib -lgfortran -lemutls_w -lquadmath >> > -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework >> > -Wl,CoreFoundation >> > ld: warning: directory not found for option >> > '-L/opt/R/arm64/gfortran/lib/gcc/aarch64-apple-darwin20.6.0/12.0.1' >> > ld: warning: directory not found for option >> > '-L/opt/R/arm64/gfortran/lib' >> > ld: library not found for -lgfortran >> > clang: error: linker command failed with exit code 1 (use -v to >> see >> > invocation) >> > make: *** [HACSim.so] Error 1 >> > ERROR: compilation failed for package ‘HACSim’ >> > ─ removing >> > >> ‘/private/var/folders/r4/xm5blbcd2tn06tjv00lm1c780000gn/T/RtmpN4uaYR/Rinstdf4219594de/HACSim’ >> > ----------------------------------- >> > ERROR: package installation failed >> > Error in `(function (command = NULL, args = character(), >> > error_on_status = TRUE, …`: >> > ! System command 'R' failed >> > --- >> > Exit status: 1 >> > stdout & stderr: <printed> >> > --- >> > Type .Last.error to see the more details. >> > >> > `clang` is installed (since I am able to run the code within my package) >> > and I've verified by typing `gcc` in the Mac Terminal. I've also >> installed >> > `Homebrew` and `gfortran`, verifying via typing in the Terminal. >> > >> > Any idea on what's going on how to fix the issue(s)? >> >> You don't say how you installed gfortran, but it sounds as though you >> installed Homebrew's build of it. You should install the tools as >> available from https://mac.r-project.org/tools/. >> >> Duncan Murdoch >> >> [[alternative HTML version deleted]] ______________________________________________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
