Le 16/05/2023 à 18:07, Jarrett Phillips a écrit :
Hi All,I'm trying to generate a `tar.gz` file on a Mac for R package submission to CRAN but am having issues. I'm using `devtools`, specifically `build()` and `install()`. My package relies on compiled code via `Rcpp/RcppArmadillo`. build("HACSim_OO") ── R CMD build ───────────────────────────────────────────────────────────────── ✔ checking for file ‘/Users/jarrettphillips/Desktop/HAC simulation/HACSim_OO/DESCRIPTION’ ... ─ preparing ‘HACSim’: ✔ checking DESCRIPTION meta-information ... ─ cleaning src ─ installing the package to process help pages ----------------------------------- ─ installing *source* package ‘HACSim’ ... ** using staged installation ** libs clang++ -arch arm64 -std=gnu++11 - I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/RcppArmadillo/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -Wall -pedantic -fdiagnostics-color=always -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library/RcppArmadillo/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -Wall -pedantic -fdiagnostics-color=always -c accumulate.cpp -o accumulate.o clang++ -arch arm64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o HACSim.so RcppExports.o accumulate.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/R/arm64/gfortran/lib/gcc/aarch64-apple-darwin20.6.0/12.0.1 -L/opt/R/arm64/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation ld: warning: directory not found for option '-L/opt/R/arm64/gfortran/lib/gcc/aarch64-apple-darwin20.6.0/12.0.1' ld: warning: directory not found for option '-L/opt/R/arm64/gfortran/lib' ld: library not found for -lgfortran clang: error: linker command failed with exit code 1 (use -v to see invocation) make: *** [HACSim.so] Error 1 ERROR: compilation failed for package ‘HACSim’ ─ removing ‘/private/var/folders/r4/xm5blbcd2tn06tjv00lm1c780000gn/T/RtmpN4uaYR/Rinstdf4219594de/HACSim’ ----------------------------------- ERROR: package installation failed Error in `(function (command = NULL, args = character(), error_on_status = TRUE, …`: ! System command 'R' failed --- Exit status: 1 stdout & stderr: <printed> --- Type .Last.error to see the more details. `clang` is installed (since I am able to run the code within my package) and I've verified by typing `gcc` in the Mac Terminal. I've also installed `Homebrew` and `gfortran`, verifying via typing in the Terminal. Any idea on what's going on how to fix the issue(s)?
Try to add in <your_package_dir>/src/Makevars: PKG_LIBS=$(FLIBS) Best, Serguei. ______________________________________________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
