Hello, Sorry yes, I think that my initial post on stack overflow is a bit misleading. I have checked the file that is built when I run "R CMD build ...", and it looks like what is on CRAN. The question is why is that different from when I run "devtools::build_vignette" or when I just knit the vignette in RStudio. I know that "R CMD build" creates the vignette each time from scratch. Should I update my R version or something? I'm just trying to isolate the difference between R CMD build and the other tools I have to knit vignette so I can ensure they are consistent.
Thanks for the help, Eric. > Date: Thu, 9 Dec 2021 16:52:09 -0500 > From: Eric Weine <ericwein...@gmail.com> > To: r-package-devel@r-project.org > Subject: [R-pkg-devel] R Vignette Knitting Issues in CRAN Release > Message-ID: > <CAO=DOOayQEiiunh= > 0hrzayidhjjgalq2ekrfnatsbbl0+yu...@mail.gmail.com> > Content-Type: text/plain; charset="utf-8" > > Hello, > > I'm having an issue where my vignette created using R CMD build does not > match the vignette created using devtools::build_vignettes or when I knit > with RStudio. I posted about this issue on stack overflow here > < > https://stackoverflow.com/questions/70204611/vignette-table-of-contents-missing-when-package-published-to-cran/70205623?noredirect=1#comment124116982_70205623 > >. > Originally I thought that this might be related to an omission in the > DESCRIPTION file, but this no longer seems to be the case. Here is a repost > of my initial stack overflow post: > > I recently released a vignette with version 1.1 of my R package. The Rmd > for the vignette can be found here > < > https://github.com/eweine/qqconf/blob/master/qqconf/vignettes/qqconf_introduction.Rmd > >. > When I create the vignette locally, I see author information and the table > of contents at the top of the vignette, as expected. However, when I > submitted this package to CRAN and the vignette was created there > < > https://cloud.r-project.org/web/packages/qqconf/vignettes/qqconf_introduction.html > >, > I no longer see the table of contents or author information. Does anyone > know why this may be happening? > > Thanks, > > Eric. > > [[alternative HTML version deleted]] > > > > > ------------------------------ > > Date: Fri, 10 Dec 2021 11:41:31 +1300 > From: Simon Urbanek <simon.urba...@r-project.org> > To: Eric Weine <ericwein...@gmail.com> > Cc: r-package-devel@r-project.org > Subject: Re: [R-pkg-devel] R Vignette Knitting Issues in CRAN Release > Message-ID: <52ec72dc-b583-4d1b-97c3-979ec96ff...@r-project.org> > Content-Type: text/plain; charset="us-ascii" > > Eric, > > did you check the contents of the package file you submitted? The session > info in the vignette is quite old, and the build has been packaged by you > so I don't think it has anything to do with CRAN, but to make sure, check > the file you submitted. > > Cheers, > Simon > > > > On Dec 10, 2021, at 10:52 AM, Eric Weine <ericwein...@gmail.com> wrote: > > > > Hello, > > > > I'm having an issue where my vignette created using R CMD build does not > > match the vignette created using devtools::build_vignettes or when I knit > > with RStudio. I posted about this issue on stack overflow here > > < > https://stackoverflow.com/questions/70204611/vignette-table-of-contents-missing-when-package-published-to-cran/70205623?noredirect=1#comment124116982_70205623 > >. > > Originally I thought that this might be related to an omission in the > > DESCRIPTION file, but this no longer seems to be the case. Here is a > repost > > of my initial stack overflow post: > > > > I recently released a vignette with version 1.1 of my R package. The Rmd > > for the vignette can be found here > > < > https://github.com/eweine/qqconf/blob/master/qqconf/vignettes/qqconf_introduction.Rmd > >. > > When I create the vignette locally, I see author information and the > table > > of contents at the top of the vignette, as expected. However, when I > > submitted this package to CRAN and the vignette was created there > > < > https://cloud.r-project.org/web/packages/qqconf/vignettes/qqconf_introduction.html > >, > > I no longer see the table of contents or author information. Does anyone > > know why this may be happening? > > > > Thanks, > > > > Eric. > > > > [[alternative HTML version deleted]] > > > > ______________________________________________ > > R-package-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/r-package-devel > > > > > > > ------------------------------ > > Date: Fri, 10 Dec 2021 05:38:15 -0500 > From: Duncan Murdoch <murdoch.dun...@gmail.com> > To: Eric Weine <ericwein...@gmail.com> > Cc: r-package-devel@r-project.org > Subject: Re: [R-pkg-devel] R Vignette Knitting Issues in CRAN Release > Message-ID: <02621081-6881-de33-2d8f-a5bcdcc3c...@gmail.com> > Content-Type: text/plain; charset="utf-8"; Format="flowed" > > On 09/12/2021 5:41 p.m., Simon Urbanek wrote: > > Eric, > > > > did you check the contents of the package file you submitted? The > session info in the vignette is quite old, and the build has been packaged > by you so I don't think it has anything to do with CRAN, but to make sure, > check the file you submitted. > > Yes, I think the tarball contained an old version of the .html file. > The timestamp on it is the same as on many other items in the tarball, > and that likely means it was put into inst/doc by the build process. > > Eric, on Github I notice you have a committed copy of the HTML file in > the vignettes directory. This could be the cause of your problem. > Normally you should only have the vignette source in the vignettes > directory. I wouldn't be surprised if git the build process thinks the > .html file is newer than the .Rmd and doesn't rebuild it, putting a > stale copy into the tarball. > > Duncan Murdoch > > > > > Cheers, > > Simon > > > > > >> On Dec 10, 2021, at 10:52 AM, Eric Weine <ericwein...@gmail.com> wrote: > >> > >> Hello, > >> > >> I'm having an issue where my vignette created using R CMD build does not > >> match the vignette created using devtools::build_vignettes or when I > knit > >> with RStudio. I posted about this issue on stack overflow here > >> < > https://stackoverflow.com/questions/70204611/vignette-table-of-contents-missing-when-package-published-to-cran/70205623?noredirect=1#comment124116982_70205623 > >. > >> Originally I thought that this might be related to an omission in the > >> DESCRIPTION file, but this no longer seems to be the case. Here is a > repost > >> of my initial stack overflow post: > >> > >> I recently released a vignette with version 1.1 of my R package. The Rmd > >> for the vignette can be found here > >> < > https://github.com/eweine/qqconf/blob/master/qqconf/vignettes/qqconf_introduction.Rmd > >. > >> When I create the vignette locally, I see author information and the > table > >> of contents at the top of the vignette, as expected. However, when I > >> submitted this package to CRAN and the vignette was created there > >> < > https://cloud.r-project.org/web/packages/qqconf/vignettes/qqconf_introduction.html > >, > >> I no longer see the table of contents or author information. Does anyone > >> know why this may be happening? > >> > >> Thanks, > >> > >> Eric. > >> > >> [[alternative HTML version deleted]] > >> > >> ______________________________________________ > >> R-package-devel@r-project.org mailing list > >> https://stat.ethz.ch/mailman/listinfo/r-package-devel > >> > > > > ______________________________________________ > > R-package-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/r-package-devel > > > > ********************************************** [[alternative HTML version deleted]] ______________________________________________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
