Dear Henrik, My undesranding is that rdevel testing servers using are ahead of the current Bioconductor release. However; I’m not confident I am correct.
Andy On Thu, 30 Nov 2017 at 23:26 Henrik Bengtsson <henrik.bengts...@gmail.com> wrote: > >> On 30.11.2017 12:52, Andrew Holding wrote: > >> [...] I know the new Bioconductor on devel is unstable [...] > > Does CRAN support packages in the Bioconductor *devel* repository? > > /Henrik > > On Thu, Nov 30, 2017 at 2:54 PM, Andrew Holding <an...@cam.ac.uk> wrote: > > Dear Uwe, > > > > Just submitted the package again and got the same error. I’ve copied it > > below for reference. > > > > Andy > > > > Found the following significant warnings: > > > > Warning: namespace 'BiocFileCache' is not available and has been > replaced > > Warning: namespace 'AnnotationFilter' is not available and has been > replaced > > Warning: namespace 'Organism.dplyr' is not available and has been > replaced > > See 'd:/RCompile/CRANincoming/R-devel/Brundle.Rcheck/00install.out' for > details. > > > > > > On Thu, 30 Nov 2017 at 22:18 Uwe Ligges <lig...@statistik.tu-dortmund.de > > > > wrote: > > > >> Have you submitted a second time? Sounds like BioC wasa uodated on the > >> build machine when you submitted. > >> > >> Best, > >> Uwe Ligges > >> > >> > >> > >> On 30.11.2017 12:52, Andrew Holding wrote: > >> > Hi all, > >> > > >> > I’m trying to upload a new version of my package and it was > automatically > >> > bounced because of the following warnings: > >> > > >> > Warning: namespace 'BiocFileCache' is not available and has been > replaced > >> > > >> > Warning: namespace 'AnnotationFilter' is not available and has been > >> replaced > >> > > >> > Warning: namespace 'Organism.dplyr' is not available and has been > >> replaced > >> > > >> > > >> > Theses all seem to be related to the bioconductor annotation in one of > >> the > >> > loaded packages. I know the new Bioconductor on devel is unstable but > I > >> > thought I should check before suggesting the pretest rejection was a > >> false > >> > positive to see if there was a resolution. > >> > > >> > Cheers, > >> > > >> > Andy > >> > > >> > > -- > > Dr Andrew Holding > > Fellow of Biochemistry / Senior Research Associate > > Downing College / Cancer Research UK Cambridge Institute > > CRUK CI: 01223 769696 > > Mobile: 07595 666459 > > > > [[alternative HTML version deleted]] > > > > ______________________________________________ > > R-package-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/r-package-devel > -- Dr Andrew Holding Fellow of Biochemistry / Senior Research Associate Downing College / Cancer Research UK Cambridge Institute CRUK CI: 01223 769696 Mobile: 07595 666459 [[alternative HTML version deleted]] ______________________________________________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
