On 28/07/15 08:33, Charlotte wrote:
Hello

I have count values for abundance which follow a pattern of
over-dispersal with many zero values.  I have read a number of
documents which suggest that I don't use data transforming methods
but rather than I run the GLM with the quasi poisson distribution.
So I have written my script and R is telling me that Y should be more
than 0.

No,  R  is telling you that you must have 0 <= y <= 1 (see below).
For count data you should not use the binomial family, but rather 'poisson', or 'quasipoisson'.

?family

Göran

Everything I read tells me to do it this way but I can't get R to
agree. Did I need to add something else to my script to get it to
work and keep my data untransformed? The script I wrote is as
follows:

fit <- glm(abundance~Gender,data=teminfest,family=binomial())

then I get this error Error in eval(expr, envir, enclos) : y values
must be 0 <= y <= 1

I don't use R a lot so I am having trouble figuring out what to do
next.

I would appreciate some help

Many Thanks Charlotte






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