Nofe 1. Read the posting guide. You have to give us a repreducible example
On 17 June 2013 20:49, nofe ganmi <nghan...@gmail.com> wrote: > dear all, > > I am a student in cs college. I would like to know how to plot infinte > number of genes after using the svm. > > the data set i have consists of > > x which is a matrix of 39 cancer patients [rows] and 2000 gene names > [colmns]. each cell is the value of the gene for a particular patient. > there are two types of cancer people representedas factor y. > > here is the code: > library(e1071) > #load database > > db <- > > read.csv(file="databases\\colon-cancer\\colon-cancer.csv",head=FALSE,sep=",") > > x = as.matrix(db[,1:(ncol(db)-1)]) > y = as.factor(db[,ncol(db)]) > > > svmModel = svm(x, y, cost = 10, cachesize=500, scale=F, > type="C-classification", kernel="linear" ) > > Now how to plot this infinte number of genes after classification using > SVM??? > > thanks > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. > -- Christiaan Pauw Nova Institute www.nova.org.za [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
