dear all, I am a student in cs college. I would like to know how to plot infinte number of genes after using the svm.
the data set i have consists of x which is a matrix of 39 cancer patients [rows] and 2000 gene names [colmns]. each cell is the value of the gene for a particular patient. there are two types of cancer people representedas factor y. here is the code: library(e1071) #load database db <- read.csv(file="databases\\colon-cancer\\colon-cancer.csv",head=FALSE,sep=",") x = as.matrix(db[,1:(ncol(db)-1)]) y = as.factor(db[,ncol(db)]) svmModel = svm(x, y, cost = 10, cachesize=500, scale=F, type="C-classification", kernel="linear" ) Now how to plot this infinte number of genes after classification using SVM??? thanks [[alternative HTML version deleted]] ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.