I don't think I understand. Can you work up a dummy example that will
run independent of your actual data, and produce the problem? This
will help everyone diagnose the problem. Naively this sounds like an
indexing problem.
Stephen
On Mon, Mar 21, 2011 at 7:56 AM, Who Am I? <s1008...@student.hsleiden.nl> wrote:
> I forgot to say I need it to work in a for loop because it will be used for
> over 35 files. I previously programmed it in the most unorthodox way
> possible:
>
> setwd("J:/Stage/Datasets2/Datasets/outData")
> data1<-read.table("AR1000900A_N_241110_(Mapping250K_Nsp)_2,Mapping250K_Nsp,CNprobes.tab
> _SNP_IDs.xls",sep="\t", dec=",", fill=T, header=T)
> bukuA<-read.table("AR1000900A_N_241110_(Mapping250K_Nsp)_2,Mapping250K_Nsp,CNprobes.tab
> _SNP_IDs.xls _0,5 -0,51.xls", sep="\t", dec=",", fill=T, header=T)
> bukuB<-read.table("AR1000901A_N_241110_(Mapping250K_Nsp),Mapping250K_Nsp,CNprobes.tab
> _SNP_IDs.xls _0,5 -0,51.xls", sep="\t", dec=",", fill=T, header=T)
> bukuC<-read.table("AR1000902A_N_241110_(Mapping250K_Nsp),Mapping250K_Nsp,CNprobes.tab
> _SNP_IDs.xls _0,5 -0,51.xls", sep="\t", dec=",", fill=T, header=T)
> bukuD<-read.table("AR1000903A_N_291110_(Mapping250K_Nsp),Mapping250K_Nsp,CNprobes.tab
> _SNP_IDs.xls _0,5 -0,51.xls", sep="\t", dec=",", fill=T, header=T)
> bukuE<-read.table("AR1000904A_N_241110_(Mapping250K_Nsp),Mapping250K_Nsp,CNprobes.tab
> _SNP_IDs.xls _0,5 -0,51.xls", sep="\t", dec=",", fill=T, header=T)
> bukuA<-data.frame(bukuA)
> bukuB<-data.frame(bukuB)
> bukuC<-data.frame(bukuC)
> bukuD<-data.frame(bukuD)
> bukuE<-data.frame(bukuE)
> regionMatchA<-cbind(data1, bukuA[match(data1$Pos, bukuA$Pos),])
> regionMatchB<-cbind(data1, bukuB[match(data1$Pos, bukuB$Pos),])
> regionMatchC<-cbind(data1, bukuC[match(data1$Pos, bukuC$Pos),])
> regionMatchD<-cbind(data1, bukuD[match(data1$Pos, bukuD$Pos),])
> regionMatchE<-cbind(data1, bukuE[match(data1$Pos, bukuE$Pos),])
>
>
> regionMatchABCDE<-cbind(data1[,7],data1[,3],
> regionMatchA[,10:18],regionMatchB[,10:18],regionMatchC[,10:18],regionMatchD[,10:18],regionMatchE[,10:18])
> write.table(regionMatchABCDE, file= "Array0-1-2-3-4-5_0,5 -0,5.xls",
> append=F, col.names=T, row.names=F, quote=F, sep = "\t", dec=",")
>
>
> --
> View this message in context:
> http://r.789695.n4.nabble.com/appending-collums-in-for-loop-tp3393446p3393481.html
> Sent from the R help mailing list archive at Nabble.com.
>
> ______________________________________________
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> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>
--
Stephen Sefick
____________________________________
| Auburn University |
| Biological Sciences |
| 331 Funchess Hall |
| Auburn, Alabama |
| 36849 |
|___________________________________|
| sas0...@auburn.edu |
| http://www.auburn.edu/~sas0025 |
|___________________________________|
Let's not spend our time and resources thinking about things that are
so little or so large that all they really do for us is puff us up and
make us feel like gods. We are mammals, and have not exhausted the
annoying little problems of being mammals.
-K. Mullis
"A big computer, a complex algorithm and a long time does not equal science."
-Robert Gentleman
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