Tim Ko wrote at 2020-3-9 07:18 -0700: >I am trying to install a custom Python code but ran into an error. The error >presumably associated with cython. I tried a different compiler since Intel >compiler often crashes when using cython, but couldn't get it working.
Almost surely, the compiler is not to blame. >Attached is the installation error log. I have installed and updated all >essential packages such as numpy and scipy. Could someone please give me >advice to resolve this issue? Many thanks in advance. > >Sincerely, >TK > > >=================== >$ python setup.py build_ext -b PoissonSolver/ > ... >skipping 'PoissonSolver/PS_3D_cy/ps3d.c' Cython extension (up-to-date) >building 'matvec2D' extension >icc -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC >-I/home01/r782a03/.conda/envs/hko_env/lib/python3.7/site-packages/numpy/core/include > -I/home01/r782a03/.conda/envs/hko_env/include/python3.7m -c >PoissonSolver/MV_2D_cy/matvec2D.c -o >build/temp.linux-x86_64-3.7/PoissonSolver/MV_2D_cy/matvec2D.o -ffast-math > ... >PoissonSolver/MV_2D_cy/matvec2D.c(17500): error: struct "_ts" has no field >"exc_type" > *type = tstate->exc_type; Errors like this often indicate some version conflict. The "matvec2D" source obviously expects "_ts" to have a field "exc_type" but the compiler knows nothing about it. I know at least 2 reasons for such a situation: * the source expects a different (newer or older) version of a dependency * the available headers (for a dependency) are out of date. I have also seen similar errors in a case, when "cython" was not installed. In this case, the distribution came with pre-"cythonized" C sources, inadequate for my system. Installing "cython" solved this problem. You might face a similar situation: while "cython" is (likely) installed, the C source might wrongly seem up-to-date. You could try to delete it and retry. -- https://mail.python.org/mailman/listinfo/python-list
