Alecsandru Patrascu added the comment:

Thank you for your feedback, I've updated the patches and now LTO flags are 
used only when building with PGO (v04). CFLAGS/LDFLAGS remain untouched, as 
Antoine and Victor suggested is better.

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Added file: http://bugs.python.org/file41665/lto-cpython2-v04.patch

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