Martin Mokrejs added the comment:

Thank you for explanation what is going on. I called matplotlibs drawing 
function to include 49308 dots and corresponding legend items with their 
colors. That's all I can say. I am not a native English speaker so I don't know 
what 'rogue extension modules' means.

Do you think it is a matplotlib or numpy issue which were in the stacktrace? Or 
a memory module error?

I am running analyses which take weeks. Will python give me a clear 
warning/error when the object counter overflows?

So what should I do now? I am clue-less right now.

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Python tracker <rep...@bugs.python.org>
<http://bugs.python.org/issue18843>
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