Hi ZHANG Cheng, Did you try?
set all_states, on;spectrum b Another approach would to split the states into separate objects and then apply the spectrum command to each object. split_states protein.pdb; prefix=test;spectrum b,,test* Best regards, Blaine Blaine Mooers, Ph.D. Associate Professor Department of Biochemistry and Molecular Biology College of Medicine University of Oklahoma Health Sciences Center S.L. Young Biomedical Research Center (BRC) Rm. 466 975 NE 10th Street, BRC 466 Oklahoma City, OK 73104-5419 ________________________________________ From: ZHANG Cheng [272699...@qq.com] Sent: Sunday, August 30, 2020 4:40 PM To: pymol-users Subject: [EXTERNAL] [PyMOL] How to color based on b-factor for all the frames in one object in Pymol? I load a protein.pdb file into Pymol. This file has multiple frames (or states), and with different b-factor values at different frames at the PDB file b-factor columns. After running the "spectrum b" command, the colouring is only based on the last state of the object. So can I colour the frames differently using their corresponding b-factor values? In that case, I can see the colour changing throughout the frame playing. _______________________________________________ PyMOL-users mailing list Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net Unsubscribe: https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe
