Hi Julian,
I have two homotrimer proteins, i.e. 3aob and 4mt1. I want to align chain A of
4mt1 to chain B of 3aob. How to tell Pymol to align a specific chain or part of
a protein, in my case chain A of 4mt1, to a specific chain or part of another
protein, in my case chain B of 3aob?
Cheers
Mohsen
From: Mohsen Chitsaz
Sent: Wednesday, 24 February 2016 11:17 PM
To: 'Julian Heinrich' <[email protected]>
Cc: [email protected]
Subject: RE: [PyMOL] Appending a pdb file
Hi Julian,
Many Thanks for your help. It worked.
Cheers
Mohsen
From: [email protected]<mailto:[email protected]>
[mailto:[email protected]] On Behalf Of Julian Heinrich
Sent: Monday, 22 February 2016 8:24 PM
To: Mohsen Chitsaz
<[email protected]<mailto:[email protected]>>
Cc: [email protected]<mailto:[email protected]>
Subject: Re: [PyMOL] Appending a pdb file
Hi Mohsen,
if you want to superimpose structures, have a look at the align command:
http://pymolwiki.org/index.php/Align
Cheers,
Julian
On Thu, Feb 18, 2016 at 10:47 PM, Mohsen Chitsaz
<[email protected]<mailto:[email protected]>> wrote:
Hi
In order to superimpose two protein sequences, I am trying to append a pdb file
to an existing protein sequence, which I have already opened in PyMol. The
append function is not working in my PyMol. Could someone help me with this
please.
Cheers
Mohsen
------------------------------------------------------------------------------
Site24x7 APM Insight: Get Deep Visibility into Application Performance
APM + Mobile APM + RUM: Monitor 3 App instances at just $35/Month
Monitor end-to-end web transactions and take corrective actions now
Troubleshoot faster and improve end-user experience. Signup Now!
http://pubads.g.doubleclick.net/gampad/clk?id=272487151&iu=/4140
_______________________________________________
PyMOL-users mailing list
([email protected]<mailto:[email protected]>)
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/[email protected]
------------------------------------------------------------------------------
Site24x7 APM Insight: Get Deep Visibility into Application Performance
APM + Mobile APM + RUM: Monitor 3 App instances at just $35/Month
Monitor end-to-end web transactions and take corrective actions now
Troubleshoot faster and improve end-user experience. Signup Now!
http://pubads.g.doubleclick.net/gampad/clk?id=272487151&iu=/4140
_______________________________________________
PyMOL-users mailing list ([email protected])
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/[email protected]
