You can set: pse_export_version
to the 3-part version of pymol you would like to use as an export version. -David > On Oct 18, 2015, at 3:48 AM, Takanori Nakane > <takanori.nak...@bs.s.u-tokyo.ac.jp> wrote: > > Hi, > > It looks like the structure of PyMOL session (what > we got from cmd.get_session) has changed in recent upgrades. > I have to rewrite the program. > > Does anyone know if there is a setting to export in the 'old' format? > > Best regards, > > Takanori Nakane > > On 2015/10/18 1:47, Osvaldo Martin wrote: >> That really weird! the script is expecting a list but is getting an >> integer. Could you send me the "my" molecule or a pse file with that >> molecule? or at least other molecule that give you the same error? >> >> Cheers, >> Osvaldo. >> >> >> >> On Sat, Oct 17, 2015 at 5:49 PM, Albert <mailmd2...@gmail.com> wrote: >> >>> Thanks a lot for further advice. >>> >>> Here is what I got: >>> >>> PyMOL> run exportToWeb.py >>> PyMOL>exportToWeb my >>> Traceback (most recent call last): >>> File "/home/albert/install/pymol-1.7.6/modules/pymol/parser.py", line >>> 256, in parse >>> self.result=apply(layer.kw[0],layer.args,layer.kw_args) >>> File "exportToWeb.py", line 118, in dump_rep >>> ret += parseObjMol(obj) >>> File "exportToWeb.py", line 50, in parseObjMol >>> if (rep[5] == 1): >>> TypeError: 'int' object has no attribute '__getitem__' >>> >>> >>> If possible, would you please give me some suggestions? >>> >>> Thanks a lot >>> >>> Albert >>> >>> >>> >>> >>> On 10/17/2015 04:36 PM, Osvaldo Martin wrote: >>> >>> Hi Albert, >>> >>> I do the following steps and I get a .html file as expected. >>> >>> 1. I download and unpack this >>> >>> <http://sourceforge.jp/projects/webglmol/downloads/54536/pymol-exporter-0.01.zip/> >>> file. The script there seems to be similar to the one you attached. >>> 2. Lauch PyMOL and do some stuff >>> 3. cd to the folder creating during unpacking >>> 4. run the script by doing >>> >>> run exportToWeb.py >>> >>> 5. then run the commnand >>> >>> exportToWeb PymolObjectName >>> >>> where PymolObjectName is the name of the pymol object you want to >>> export >>> 6. check the unpacked folder for a file with the name >>> PymolObjectName.html >>> >>> Could you try to follow these steps and tell us what you get? >>> >>> Cheers, >>> >>> Osvaldo. >>> >>> >>> >> >> >> >> ------------------------------------------------------------------------------ >> >> >> >> _______________________________________________ >> PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) >> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users >> Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net >> > > > ------------------------------------------------------------------------------ > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net ------------------------------------------------------------------------------ _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
