Hi Stephen, I was missing libfreetype6 library and libxml2 needed to be updated.
Cheers, Arnaud On 31/01/15 19:09, Stephen P. Molnar wrote: > Seeing as youa re using a Debian derivative try the following: > > sudo apt-get install subversion build-essential python-dev python-pmw > libglew-dev freeglut3-dev libpng-dev libfreetype6-dev libxml2-dev > > cd /tmp > svn co svn://svn.code.sf.net/p/pymol/code/trunk/pymol > cd pymol > > prefix=/home/computation/Apps/pymol > modules=$prefix/modules > > python setup.py build install \ > --home=$prefix \ > --install-lib=$modules \ > --install-scripts=$prefix > > Of course, edit the file to suit your system. > > > On 01/30/2015 04:13 AM, Arnaud Basle wrote: >> Dear all, >> >> I am trying to compile pymol from source following the instructions >> here: http://www.pymolwiki.org/index.php/Linux_Install >> >> It used to work for me a while ago but now the compilation hangs without >> error. Pressing return give me back the terminal prompt. The compiling >> process does not stop always at the same point. >> >> I am using Linux Mint 17 64 bits (based on Ubuntu). >> >> Anyone has seen such behaviour? >> >> Cheers, >> Arnaud >> PS: see below example of output >> >> layer3/Selector.cpp:11037:36: warning: comparison between signed and >> unsigned integer expressions [-Wsign-compare] >> for(a = cNDummyAtoms; a < I->NAtom; a++) >> ^ >> layer3/Selector.cpp: In function ‘int* SelectorEvaluate(PyMOLGlobals*, >> char (*)[1024], int, int)’: >> layer3/Selector.cpp:11107:15: warning: variable ‘opFlag2’ set but not >> used [-Wunused-but-set-variable] >> int opFlag, opFlag2, maxLevel; >> ^ >> layer3/Selector.cpp:11108:19: warning: variable ‘cc2’ set but not used >> [-Wunused-but-set-variable] >> char *q, *cc1, *cc2; >> ^ >> layer3/Selector.cpp: In function ‘char (* SelectorParse(PyMOLGlobals*, >> char*))[1024]’: >> layer3/Selector.cpp:11562:51: warning: comparison between signed and >> unsigned integer expressions [-Wsign-compare] >> if((q - q_base) >= sizeof(SelectorWordType)) { >> ^ >> layer3/Selector.cpp: In function ‘DistSet* >> SelectorGetDistSet(PyMOLGlobals*, DistSet*, int, int, int, int, int, >> float, float*)’: >> layer3/Selector.cpp:11845:32: warning: comparison between signed and >> unsigned integer expressions [-Wsign-compare] >> for(a = cNDummyAtoms; a < I->NAtom; a++) { >> ^ >> layer3/Selector.cpp:11859:34: warning: comparison between signed and >> unsigned integer expressions [-Wsign-compare] >> for(a = cNDummyAtoms; a < I->NAtom; a++) { >> ^ >> layer3/Selector.cpp: In function ‘DistSet* >> SelectorGetAngleSet(PyMOLGlobals*, DistSet*, int, int, int, int, int, >> int, int, float*, int*)’: >> layer3/Selector.cpp:12102:34: warning: comparison between signed and >> unsigned integer expressions [-Wsign-compare] >> for(a = cNDummyAtoms; a < I->NAtom; a++) { >> ^ >> layer3/Selector.cpp:12118:34: warning: comparison between signed and >> unsigned integer expressions [-Wsign-compare] >> for(a = cNDummyAtoms; a < I->NAtom; a++) { >> ^ >> layer3/Selector.cpp:12146:36: warning: comparison between signed and >> unsigned integer expressions [-Wsign-compare] >> for(a = cNDummyAtoms; a < I->NAtom; a++) { >> ^ >> layer3/Selector.cpp: In function ‘DistSet* >> SelectorGetDihedralSet(PyMOLGlobals*, DistSet*, int, int, int, int, int, >> int, int, int, int, float*, int*)’: >> layer3/Selector.cpp:12378:34: warning: comparison between signed and >> unsigned integer expressions [-Wsign-compare] >> for(a = cNDummyAtoms; a < I->NAtom; a++) { >> ^ >> layer3/Selector.cpp:12428:34: warning: comparison between signed and >> unsigned integer expressions [-Wsign-compare] >> for(a = cNDummyAtoms; a < I->NAtom; a++) { >> ^ >> layer3/Selector.cpp:12474:38: warning: comparison between signed and >> unsigned integer expressions [-Wsign-compare] >> for(a = cNDummyAtoms; a < I->NAtom; a++) { >> ^ >> layer3/Selector.cpp: In function ‘int SelectorLoadCoords(PyMOLGlobals*, >> PyObject*, int, int)’: >> layer3/Selector.cpp:6705:9: warning: ‘itemsize’ may be used >> uninitialized in this function [-Wmaybe-uninitialized] >> switch(itemsize) { >> ^ >> >> >> ... and then nothing >> > -- Dr Arnaud Basle X-ray facilities manager Newcastle Structural Biology Laboratory University of Newcastle Medical School ICAMB Framlington place NE2 4HH Newcastle upon tyne Phone 0191 208 8931 ------------------------------------------------------------------------------ Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration & more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=190641631&iu=/4140/ostg.clktrk _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
