Dear all,
I am trying to compile pymol from source following the instructions
here: http://www.pymolwiki.org/index.php/Linux_Install
It used to work for me a while ago but now the compilation hangs without
error. Pressing return give me back the terminal prompt. The compiling
process does not stop always at the same point.
I am using Linux Mint 17 64 bits (based on Ubuntu).
Anyone has seen such behaviour?
Cheers,
Arnaud
PS: see below example of output
layer3/Selector.cpp:11037:36: warning: comparison between signed and
unsigned integer expressions [-Wsign-compare]
for(a = cNDummyAtoms; a < I->NAtom; a++)
^
layer3/Selector.cpp: In function ‘int* SelectorEvaluate(PyMOLGlobals*,
char (*)[1024], int, int)’:
layer3/Selector.cpp:11107:15: warning: variable ‘opFlag2’ set but not
used [-Wunused-but-set-variable]
int opFlag, opFlag2, maxLevel;
^
layer3/Selector.cpp:11108:19: warning: variable ‘cc2’ set but not used
[-Wunused-but-set-variable]
char *q, *cc1, *cc2;
^
layer3/Selector.cpp: In function ‘char (* SelectorParse(PyMOLGlobals*,
char*))[1024]’:
layer3/Selector.cpp:11562:51: warning: comparison between signed and
unsigned integer expressions [-Wsign-compare]
if((q - q_base) >= sizeof(SelectorWordType)) {
^
layer3/Selector.cpp: In function ‘DistSet*
SelectorGetDistSet(PyMOLGlobals*, DistSet*, int, int, int, int, int,
float, float*)’:
layer3/Selector.cpp:11845:32: warning: comparison between signed and
unsigned integer expressions [-Wsign-compare]
for(a = cNDummyAtoms; a < I->NAtom; a++) {
^
layer3/Selector.cpp:11859:34: warning: comparison between signed and
unsigned integer expressions [-Wsign-compare]
for(a = cNDummyAtoms; a < I->NAtom; a++) {
^
layer3/Selector.cpp: In function ‘DistSet*
SelectorGetAngleSet(PyMOLGlobals*, DistSet*, int, int, int, int, int,
int, int, float*, int*)’:
layer3/Selector.cpp:12102:34: warning: comparison between signed and
unsigned integer expressions [-Wsign-compare]
for(a = cNDummyAtoms; a < I->NAtom; a++) {
^
layer3/Selector.cpp:12118:34: warning: comparison between signed and
unsigned integer expressions [-Wsign-compare]
for(a = cNDummyAtoms; a < I->NAtom; a++) {
^
layer3/Selector.cpp:12146:36: warning: comparison between signed and
unsigned integer expressions [-Wsign-compare]
for(a = cNDummyAtoms; a < I->NAtom; a++) {
^
layer3/Selector.cpp: In function ‘DistSet*
SelectorGetDihedralSet(PyMOLGlobals*, DistSet*, int, int, int, int, int,
int, int, int, int, float*, int*)’:
layer3/Selector.cpp:12378:34: warning: comparison between signed and
unsigned integer expressions [-Wsign-compare]
for(a = cNDummyAtoms; a < I->NAtom; a++) {
^
layer3/Selector.cpp:12428:34: warning: comparison between signed and
unsigned integer expressions [-Wsign-compare]
for(a = cNDummyAtoms; a < I->NAtom; a++) {
^
layer3/Selector.cpp:12474:38: warning: comparison between signed and
unsigned integer expressions [-Wsign-compare]
for(a = cNDummyAtoms; a < I->NAtom; a++) {
^
layer3/Selector.cpp: In function ‘int SelectorLoadCoords(PyMOLGlobals*,
PyObject*, int, int)’:
layer3/Selector.cpp:6705:9: warning: ‘itemsize’ may be used
uninitialized in this function [-Wmaybe-uninitialized]
switch(itemsize) {
^
... and then nothing
--
Dr Arnaud Basle X-ray facilities manager
Newcastle Structural Biology Laboratory
University of Newcastle
Medical School
ICAMB
Framlington place
NE2 4HH Newcastle upon tyne
Phone 0191 208 8931
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