Hey :)
"Image{}.png".format(str(i).zfill(4))
can also be written
Image{:04d}.png".format(i)
Cheers,
Tsjerk
On Tue, Jan 6, 2015 at 4:52 PM, Matthew Baumgartner <mp...@pitt.edu> wrote:
> Be sure to reply to the list so everyone can benefit from the questions
> and answers.
>
> Ah, as Tsjerk mentioned, you need to wrap it in a python-python end block.
>
>
> set ray_opaque_background, 0
>
> png C:\Users\Brenton\Documents\Chem Structures\PDBs\2\2HYY -
> imatinib\PyMOL movie\Image0001.png, dpi=300, ray=1
>
> python
> for i in range(2,61):
> cmd.rotate('y', 6)
> cmd.png("C:\Users\Brenton\Documents\Chem Structures\PDBs\2\2HYY -
> imatinib\PyMOL movie\Image{}.png".format(str(i).zfill(4)), dpi=300, ray=1)
> python end
>
>
> On 01/06/2015 10:40 AM, Brenton Horne wrote:
> > Sure is this is my code atm:
> >
> > set ray_opaque_background, 0
> >
> > png C:\Users\Brenton\Documents\Chem Structures\PDBs\2\2HYY -
> > imatinib\PyMOL movie\Image0001.png, dpi=300, ray=1
> >
> > for i in range(2,61):
> >
> > rotate y, 6
> >
> > cmd.png("C:\Users\Brenton\Documents\Chem Structures\PDBs\2\2HYY -
> > imatinib\PyMOL movie\Image{}.png".format(str(i).zfill(4)), dpi=300,
> > ray=1)
> >
> >
> > On 7/01/2015 1:33 AM, Matthew Baumgartner wrote:
> >> Is it in your for loop?
> >>
> >> for i in range(2,61):
> >> rotate y, 6
> >> cmd.png("C:\Users\Brenton\Documents\Chem Structures\PDBs\2\2HYY -
> >> imatinib\PyMOL movie\Image{}.png".format(str(i).zfill(4)), dpi=300,
> >> ray=1)
> >>
> >> On 1/6/15, 10:13 AM, Brenton Horne wrote:
> >>> That gave the error:
> >>>
> >>> cmd.png("C:\Users\Brenton\Documents\Chem Structures\PDBs\2\2HYY -
> >>> imatinib\PyMOL movie\Image{}.png".format(str(i).zfill(4)), dpi=300,
> >>> ray=1)
> >>> Traceback (most recent call last):
> >>> File "C:\Python27\lib\site-packages\pymol\parser.py", line 464, in
> >>> parse
> >>> exec(layer.com2+"\n",self.pymol_names,self.pymol_names)
> >>> File "<string>", line 1, in <module>
> >>> NameError: name 'i' is not defined
> >>>
> >>> On 7/01/2015 1:03 AM, Matthew Baumgartner wrote:
> >>>> cmd.png("C:\Users\Brenton\Documents\Chem Structures\PDBs\2\2HYY -
> >>>> imatinib\PyMOL movie\Image{}.png".format(str(i).zfill(4)), dpi=300,
> >>>> ray=1)
> >>>
> >>
> >>
> >
>
>
>
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--
Tsjerk A. Wassenaar, Ph.D.
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leadership blogs to news, videos, case studies, tutorials and more. Take a
look and join the conversation now. http://goparallel.sourceforge.net
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