also please tell me how is it possible to include ter record at the end of
each model.
James
2014-08-27 11:58 GMT+02:00 James Starlight <jmsstarli...@gmail.com>:
> Dear Pymol users!
>
> Using below script I can load all pdbs from the work dir into 1 nmr-like
> object. Could you suggest me how this script could be modified to make
> alignment (or it's better structural alignment) of all pdbs against first
> loaded pdb file
>
> from pymol import cmd
> import sys,glob
>
> def get_file_list(files):
> file_list = glob.glob(files)
> return file_list
>
> def load_models(files,obj,discrete=0):
> """
> load_models <files>, <object>, <discrete=0>
>
> loads multiple files (using filename globbing)
> into a single object (e.g. from modelling or NMR).
>
> use discrete=1 if you want to color individual states separately
>
> e.g. load_models prot_*.pdb, prot
> """
> if type(files) == type('string'):
> file_list = get_file_list(files)
> else:
> file_list = files
>
> if file_list:
> file_list.sort()
> for name in file_list:
> cmd.load(name,obj,discrete=discrete)
> else:
> print "No files found for pattern %s" % files
>
> cmd.extend('load_models',load_models)
>
>
> Many thanks for help,
>
> James
>
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