Remember this setting will only change the appearance of alpha helices. If you
are trying to change the appearance of sheets and loops you need to use their
settings.
Cheers,
Chris
--
Christopher L. Colbert, Ph.D.
Assistant Professor
Department of Chemistry and Biochemistry
North Dakota State University
P.O. Box 6050 Dept. 2710
Fargo, ND 58108-6050
From: "H. Adam Steinberg"
<h.adam.steinb...@gmail.com<mailto:h.adam.steinb...@gmail.com>>
Date: Monday, August 25, 2014 11:26 AM
To: Hena Dutta <hdutt...@gmail.com<mailto:hdutt...@gmail.com>>
Cc:
"<pymol-users@lists.sourceforge.net<mailto:pymol-users@lists.sourceforge.net>>"
<pymol-users@lists.sourceforge.net<mailto:pymol-users@lists.sourceforge.net>>
Subject: Re: [PyMOL] Cartoon_oval_length
1) Go to Settings in the menus and choose Edit all.
In the new window that appears type "oval" in the search box.
Double click the default value for cartoon_oval_length, enter your chosen
preference, and hit the enter key on your keyboard.
You should see your change.
2) If this doesn't work, you see no change, then the selection for your chosen
object has been directly modified by script.
You can check this by opening a new PyMOL session and open any pdb file. Apply
the default changes to cartoon oval length as described above in #1, if it
works, then #2 needs to be changed.
To change #2, choose the exact same selection that you (or someone else)
modified in the past and set the cartoon oval length for just that selection...
set cartoon_oval_length, 0.6, "your selection or pdb name".
On Aug 25, 2014, at 9:57 AM, Hena Dutta
<hdutt...@gmail.com<mailto:hdutt...@gmail.com>> wrote:
Hi,
I am trying to change the cartoon oval length using the command
set cartoon_oval_length, 0.6
But, it is not showing any change. I am using pymol 1.6.0.0 in windows 8.1
Can someone help me?
Regards,
Hena
------------------------------------------------------------------------------
Slashdot TV.
Video for Nerds. Stuff that matters.
http://tv.slashdot.org/_______________________________________________
PyMOL-users mailing list
(PyMOL-users@lists.sourceforge.net<mailto:PyMOL-users@lists.sourceforge.net>)
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
H. Adam Steinberg
7904 Bowman Rd
Lodi, WI 53555
608/592-2366
------------------------------------------------------------------------------
Slashdot TV.
Video for Nerds. Stuff that matters.
http://tv.slashdot.org/
_______________________________________________
PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
