Hi Matt, plugins are not loaded automatically in headless mode. You have to import your plugin first if you want to use it from a script. Something like:
import pmg_tk.startup.yourplugin The plugin manager tells you the python module name of your plugin when you click on "Info". Cheers, Thomas On 01 Apr 2014, at 08:23, mante...@gmail.com wrote: > Hi all, > > I'm trying to run a PyMOL script from command line that invokes some > custom plugins I've written. Everything works as supposed in GUI mode, > but when running the script from command line, the parser complains that > can't find any of the plugin commands included in the PyMOL script. > > This is the message I'm getting: > > Traceback (most recent call last): > File "/home/matt/PyMOL/modules/pymol/parser.py", line 464, in parse > exec(layer.com2+"\n",self.pymol_names,self.pymol_names) > File "<string>", line 1 > cellcalc 3,3,3 > > > Any ideas? > > Thanks in advance > > matt -- Thomas Holder PyMOL Developer Schrödinger, Inc. ------------------------------------------------------------------------------ _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
