On Sun, Mar 23, 2014 at 06:02:32PM -0400, Thomas Holder wrote:
> Hi David,
> 
> very well analyzed. You are right that noInvalidateMMStereoAndTextType should 
> never be set to 0 in the open-source version, we will fix that.
> 
> FYI: The incentive version of PyMOL can use a proprietary Schrödinger library 
> to assign text_type and stereochemistry, in which case that flag is used.
> 
Thanks for the update - it just didnt look right - I can see having a function 
to clear it and set it
(I noticed you can set text_type with alter)
- and its not consistent with numeric/custom type which also seemed to be 
associated with potential type
but it didnt make sense that in order to see the type field you would need to 
read the mol2 in, then
have an extension command which re-parses the mol2 file and set it using alter

(Ive found using git svn works nicely - Im getting used to git for many other 
systems including my old fortran
sources previously in RCS/CVS
- which allowed me to track the update to the svn revision 3938 PyMOL version 
1.4b1 - and no changes since then)


David

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