Dear PyMOL Users,
I am trying to run some pymol functions from a python script. For
simplicity purposes, the script is called "script.py" and it's as simple as
this :
#cat script.py
import pymol
#
Then I run it like this :
#export PYMOL_PATH=/opt/soft/pymol-v1.5.0.3
#export PYTHONPATH=/opt/soft/pymol-v1.5.0.3/modules
#python script.py
Traceback (most recent call last):
File "py.py", line 1, in <module>
import pymol
File "/opt/soft/pymol-v1.5.0.3/modules/pymol/__init__.py", line 473, in
<module>
import _cmd
ImportError: No module named _cmd
I don't understand why is it giving this error. I am running CentOS 6.2. I
have edited $PYMOL_PATH/modules/pymol/__init.py__ and checked the
instructions on the top of the file. It says :
# THE SUPPORTED WAY:
# "python pymol/__init__.py" in an environment in which $PYMOL_PATH
# points to the main PyMOL directory and $PYTHONPATH includes
# $PYMOL_PATH/modules or where the contents of $PYMOL_PATH/modules
# have been installed in a standard location such as
# /usr/lib/python2.1/site-packages
Well, this isn't working for me.
Could someone please provide some help ?
Thanks.
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