(yes, I meant "forward compatibility" there)
Jason, in our 100+ PyMOL session files that we can now read into Jmol we
have a few files that don't seem to have backward compatibility to PyMOL
1.3 from the open source version 1.6.0.0. Mostly it has to do with CGOs and
measurements. Should I just send them to you and/or Thomas?
Bob
On Thu, Jun 20, 2013 at 7:36 AM, Jason Vertrees <
jason.vertr...@schrodinger.com> wrote:
> Hi David,
>
> If you save a session file in the latest version of PyMOL there is never
> the expectation that prior versions can read that file. Such "forward
> compatibility" (of the older versions) is not supported. We do support,
> however, "backward compatibility" which is when newer versions of PyMOL
> read older session files.
>
> Cheers,
>
> -- Jason
>
>
> On Wed, Jun 19, 2013 at 4:18 PM, David Hall <li...@cowsandmilk.net> wrote:
>
>> I still have this problem:
>> session saved in 1.6 with a black background; opens in 1.5 (and earlier)
>> with a red background
>>
>> Many of my collaborators use old versions of pymol, frequently installed
>> onto their machines when they were bought X years ago, and this essentially
>> makes it so I cannot use pymol 1.6 as I cannot share sessions with them (at
>> least not without getting weird e-mails asking why I have a sudden affinity
>> for the color red).
>>
>> -David
>>
>>
>>
>>
>> On Tue, Jun 18, 2013 at 7:37 AM, Thomas Holder <
>> thomas.hol...@schrodinger.com> wrote:
>>
>>> This is fixed in SVN rev 4032.
>>>
>>> Cheers,
>>> Thomas
>>>
>>> Thomas Holder wrote, On 06/15/13 10:45:
>>> > Hi Rob,
>>> >
>>> > this has not been fixed yet, I'm really sorry. We'll look into this
>>> > ASAP. It only affects the open-source code, apparently we missed
>>> > something when syncing with the incentive codebase.
>>> >
>>> > Cheers,
>>> > Thomas
>>> >
>>> > On Jun 14, 2013, at 9:23 PM, Robert Campbell <
>>> robert.campb...@queensu.ca> wrote:
>>> >> Hello Thomas and David,
>>> >>
>>> >> Was there any resolution of this? I've just compiled the latest
>>> version
>>> >> from SVN and I have the same problem opening files created under
>>> version
>>> >> 1.5.0. This is on Debian testing (32-bit).
>>> >>
>>> >> Cheers,
>>> >> Rob
>>> >>
>>> >> On Fri, 2013-04-26 19:15 EDT, David Hall <li...@cowsandmilk.net>
>>> >> wrote:
>>> >>
>>> >>> Hi Thomas,
>>> >>>
>>> >>> I'm running into issues with color compatibility between 1.6 and
>>> >>> earlier versions when opening pses
>>> >>> (a) when I open any 1.5 pse in 1.6, I see a bunch of errors like:
>>> >>> Setting-Error: type read mismatch (color) 6
>>> >>> Setting-Error: type read mismatch (color) 663
>>> >>> Setting-Error: type read mismatch (color) 664
>>> >>> (b) background color disparity:
>>> >>> saved in 1.5 with black background; opens in 1.6 with a white
>>> background
>>> >>> saved in 1.6 with a blackground; opens in 1.5 (and earlier) with a
>>> red
>>> >>> background
>>> >>>
>>> >>> These are run on openSUSE 12.3 with SVN rev 4028 . On a side note,
>>> >>> others who would like to beta test can use devel:languages:python
>>> repo
>>> >>> in openSUSE:
>>> >>>
>>> https://build.opensuse.org/package/show?package=pymol&project=devel%3Alanguages%3Apython
>>> >>>
>>> >>> -David
>>>
>>> --
>>> Thomas Holder
>>> PyMOL Developer
>>> Schrödinger Contractor
>>>
>>>
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>>
>>
>>
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>
>
>
> --
> Jason Vertrees, PhD
> Director of Core Modeling Products
> Schrödinger, Inc.
>
> (e) jason.vertr...@schrodinger.com
> (o) +1 (603) 374-7120
>
>
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>
--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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