Hi Leila,

There is no automated way to replace the base pair like there is for
editing proteins. You will need to use the builder to edit the
structure and remove the pair. Next, you stitch in the counterpart
using probably the "fuse" command.

Cheers,

-- Jason

On Wed, Feb 1, 2012 at 6:16 AM, leila karami <karami.lei...@gmail.com> wrote:
> Dear pymol users
>
> I want to mutate one basepair in dna.
>
> For example:  GC ----> AT
>
> Number of residues are as follows: G69 , C78.
>
> How to do that.
>
> Any help will highly appreciated.
>
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-- 
Jason Vertrees, PhD
PyMOL Product Manager
Schrodinger, LLC

(e) jason.vertr...@schrodinger.com
(o) +1 (603) 374-7120

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