Hi Sree,

After your map is loaded click: Wizard > Density. The map will
replicate according to the symmetry operators.

Cheers,

-- Jason

On Thu, Dec 1, 2011 at 12:53 PM, SREEJESH SHANKER <sreejes...@gmail.com> wrote:
> Hi
>
> I am having trouble to generate an electron density map (2FoFc) around some
> selected residues and metal ion ligand. I have data as MTZfile which I use
> to generate my map using FFT in ccp4i  then further add a .ccp4 extension
> for pymol to read. Then I give the map double command select the residues
> and Ion and use the isomesh command with 1.0sigma and 1.8 radius. The result
> I get is a very crappy broken map in the vicinity of the selected residues
> but not exactly surrounding it. I can see the map fitting nicely in coot.
>
> Any help is highly appreciated.
>
> Regards
> Sree
>
> ------------------------------------------------------------------------------
> All the data continuously generated in your IT infrastructure
> contains a definitive record of customers, application performance,
> security threats, fraudulent activity, and more. Splunk takes this
> data and makes sense of it. IT sense. And common sense.
> http://p.sf.net/sfu/splunk-novd2d
> _______________________________________________
> PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
> Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net



-- 
Jason Vertrees, PhD
PyMOL Product Manager
Schrodinger, LLC

(e) jason.vertr...@schrodinger.com
(o) +1 (603) 374-7120

------------------------------------------------------------------------------
All the data continuously generated in your IT infrastructure 
contains a definitive record of customers, application performance, 
security threats, fraudulent activity, and more. Splunk takes this 
data and makes sense of it. IT sense. And common sense.
http://p.sf.net/sfu/splunk-novd2d
_______________________________________________
PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net

Reply via email to