Hi
I am having trouble to generate an electron density map (2FoFc) around some
selected residues and metal ion ligand. I have data as MTZfile which I use
to generate my map using FFT in ccp4i then further add a .ccp4 extension
for pymol to read. Then I give the map double command select the residues
and Ion and use the isomesh command with 1.0sigma and 1.8 radius. The
result I get is a very crappy broken map in the vicinity of the selected
residues but not exactly surrounding it. I can see the map fitting nicely
in coot.
Any help is highly appreciated.
Regards
Sree
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