Hi Tanja,
Try:
pymol -qcd 'cmd.help("launching")' > pymol_launching.txt
and examine the resulting file :)
Cheers,
Tsjerk
On Wed, Oct 29, 2008 at 7:48 PM, Tanja Mittag <tanja.mit...@gmx.de> wrote:
> Hi!
>
> I would like to run pymol scripts on the command line only without
> invoking the x-window because there is no need to display the structures
> involved (and also no way because I will run this on a Linux computer
> cluster). I am only interested in the pymol text output that can be
> piped into an output file. For example like this:
>
> Pymol.com script.pml > log.out
>
> I just want to avoid the x-window coming up (and possible errors if it
> cannot).
>
> Thanks for your input!
>
> Cheers,
> Tanja
>
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--
Tsjerk A. Wassenaar, Ph.D.
Junior UD (post-doc)
Biomolecular NMR, Bijvoet Center
Utrecht University
Padualaan 8
3584 CH Utrecht
The Netherlands
P: +31-30-2539931
F: +31-30-2537623
