Hi!

I would like to run pymol scripts on the command line only without invoking the x-window because there is no need to display the structures involved (and also no way because I will run this on a Linux computer cluster). I am only interested in the pymol text output that can be piped into an output file. For example like this:

Pymol.com script.pml > log.out

I just want to avoid the x-window coming up (and possible errors if it cannot).

Thanks for your input!

Cheers,
Tanja

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