Hi,
One of our researchers is trying to build an electrostatic map of his model
using the APBS plugin and is generating the following error. This is
Pymol 1.0r2 on Linux with APBS 0.5.1.
Any suggestions on how to fix it would be appreciated.
Error: 11
CmdException Exception in Tk callback
Function: <function <lambda> at 0x41e06e2c> (type: <type 'function'>)
Args: ()
Traceback (innermost last):
File
"/programs/i386-linux/pymol/1.0r2/ext/lib/python2.4/site-packages/Pmw/Pmw_1_2/lib/PmwBase.py",
line 1747, in __call__
return apply(self.func, args)
File
"/programs/i386-linux/pymol/1.0r2/ext/lib/python2.4/site-packages/Pmw/Pmw_1_2/lib/PmwDialog.py",
line 153, in <lambda>
command=lambda self=self, name=name: self._doCommand(name))
File
"/programs/i386-linux/pymol/1.0r2/ext/lib/python2.4/site-packages/Pmw/Pmw_1_2/lib/PmwDialog.py",
line 132, in _doCommand
return command(name)
File "/programs/i386-linux/pymol/1.0r2/modules/pmg_tk/startup/apbs_tools.py",
line 1098, in execute
good = self.generatePqrFile()
File "/programs/i386-linux/pymol/1.0r2/modules/pmg_tk/startup/apbs_tools.py",
line 1492, in generatePqrFile
assign.missing_c_termini(sel)
File "/programs/i386-linux/pymol/1.0r2/modules/chempy/champ/assign.py", line
39, in missing_c_termini
while cmd.pop(tmp_sele2,tmp_sele1)>0: # complete the carboxy terminus
File "/programs/i386-linux/pymol/1.0r2/modules/pymol/selecting.py", line 162,
in pop
if _self._raising(r,_self): raise pymol.CmdException
CmdException: <pymol.CmdException instance at 0xb7853ec>
Thanks!
-ben
--
Ben Eisenbraun
Structural Biology Grid
http://sbgrid.org/
