Alejandro, Someone a while back wrote a beautiful script to do this for us. I posted it on the wiki. Check out http://www.pymolwiki.org/index.php/Stereo_Ray
It should have all the information you'll need. HTH, -- Jason On Fri, 2005-06-10 at 20:19 -0700, pymol-users-requ...@lists.sourceforge.net wrote: > Message: 5 > Date: Fri, 10 Jun 2005 16:25:33 -0600 > From: migalepa <migal...@cc.usu.edu> > To: pymol-users@lists.sourceforge.net > Subject: [PyMOL] ray-trace stereoview > > Pymol community, > > I'm trying to ray-trace (ray 3000,2250) a stereoview of a molecule but > the > image displayed once I save the rendered figure (trough png) > correspond to the > normal view of the molecule (no stereoview!?). Pymol seems to do it > if the > figure is saved trough the GUI, which gives a low quality result. How > can I > ray-trace (ray 3000,2250) a stereoview? > > Thanks beforehand... > > Alejandro Pabon -- Jason Vertrees (javer...@utmb.edu) BSCB Graduate Student @ UTMB, Galveston http://www.bscb.utmb.edu :: BSCB @ UTMB http://best.utmb.edu :: B.E.S.T. @ UTMB http://pymolwiki.org :: PyMol Wiki