This is, unfortunately, not the case. For our installation, rtools
already starts automatically (it's in the pmg_tk/startup directory).
Adding "run <path>/rtools.py" to the .pymolrc does not allow rtools to
be used from within the script.
Jacob
andr...@biochem.utah.edu wrote:
Jacob,
I believe rtool will always be usable if you put
run <path>/rtools.py
into your .pymolrc file.
Andreas
This is an odd concidence, since I was just about to post about
something very similar.
I would like to use rtools commands from a .pml that is read from the
command line (eg - with the -qc flag, instead of using the graphical
interface).
When starting pymol normally, rtools loads and everything is hunky dory.
However, even if I add a "run <path>/rtools.py" command to the .pml
script, none of the rtools commands are recognized. Manually running
rtools.py from within the .pml produces no errors.
Is there a way to use rtools from within a script that never sees the
graphical front end?
Jacob
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--
Jacob Corn
UC Berkeley - Berger Lab
Lab: 510-643-8893
Fax: 510-643-9290
jc...@uclink.berkeley.edu
