So I loaded 100 pdbs into one object, states 1-100. I wanted to color all states by their B factors, using the color_b script. When I use the script, it colors all states by the B factors in state 1. I saw a previous message with a similar question about doing dss by frame and the suggestion was this:
mset 1 -5 mdo 1, dss state=1 mdo 2, dss state=2 . . . When I tried to run the mdo commands, the error message said "Invalid arguments for the mdo command." Can someone point me on to the right track for doing things like color_b and dss state-by-state? Neema Salimi nsali...@itsa.ucsf.edu Graduate Student - Agard Laboratory Program in Biophysics University of California, San Francisco
