Hello, * cami...@mrc-lmb.cam.ac.uk <cami...@mrc-lmb.cam.ac.uk> [2003-04-29 14:08] wrote: > > Hello Pymol community, > I'm experiencing a problem when colouring a pdb by secondary > structure. The colour bleeds from the ends of helices and sheets into > loop. > > for example, if I were to.... > > color orange, a/49:52/ > color purple, a/53:55/ > color mred2, a/56:59/ > > > where a/49:52/ is beta strand and a/53:55/ is loop and a/56:59/ is > beta strand, I get bleed from the ends of the strand into the loop.
Try setting cartoon_discrete_colors to 'on' (or 1). set cartoon_discrete_colors, 1 or from the the "Cartoon" menu of the external GUI find "Discrete Colors" as the last item in the menu. Hope this helps, Robert -- Robert L. Campbell, Ph.D. <r...@post.queensu.ca> Senior Research Associate phone: 613-533-6821 Dept. of Biochemistry, Queen's University, fax: 613-633-2497 Kingston, ON K7L 3N6 Canada http://adelie.biochem.queensu.ca/~rlc PGP Fingerprint: 9B49 3D3F A489 05DC B35C 8E33 F238 A8F5 F635 C0E2
