Hello fellow PyMOLers,
Is the surface in PyMOL a solvent accessible surface or a molecular
surface? It looks like a solvent accessible surface to me. Is there any
way to change the radius of the water probe that is used to create the
surface? I noticed that there are a few surface settings, but I can't
figure out what effects they are having on the displayed surface. Can
anybody shed light on these commands? What are their default settings?
What are the high and low values they can take?
surface_best
surface_ normal
surface_ proximity
surface_ quality
I would like to create a fairly tight molecular surface and I just
can't figure it out. ANy help would be appreciated.
Thanks in advance,
Scott
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Scott Classen
clas...@uclink4.berkeley.edu
University of California, Berkeley
Department of Molecular & Cell Biology
327 Hildebrand Hall #3206
Berkeley, CA 94720-3206
LAB 510.643.9491
FAX 510.643.9290
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