I don't think this is a bug.  So I am replying to pspp-users@gnu.org

On Tue, Oct 21, 2014 at 01:47:11PM +0800, dear bharat wrote:
     I have been trying a couple of Factor Analysis using PSPP. At times, the
     initial communalities are not set to one. Is there a way to set it to 1.

As I recall, the initial communalities are unity for Principal Components 
Analysis
for Principal Axis Factoring they are unity only if the data are correlated.

     
     Also how can I compute factor scores from the analysis.

The factor scores are printed in the box headed "Factor Matrix" - but of course
that will only appear for Principal Axis Factoring.

J'
     

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