Just a hint: one common problem with the forcefield code is that you
forgot to check that Setup was successful (Setup can fail with crazy
molecules that are not supported by a particular forcefield). This can
result in any number of interesting segfaults if you call any other
forcefield methods afterwards.

- Noel

On 2 December 2013 09:18, Joos Kiener <joos.kie...@gmail.com> wrote:
> It seems not possible to create a simple application were this issue happens.
> As a context I'm reading in molecules, generating 3D coordinates and then
> generate the Spectrophore. In a simple script-like snippet this works.
>
> In the complete application the results are written to an output file, there
> are cli-options but fundamentally it does not do anything different and the
> code for conformer searching is the same. But here it always fails with a
> java error. And commenting
>
> conformerSearch.SetScore(score);
>
> reproducibly fixes the issue.
>
> I will investigate further to try to find a simple example to demonstrate
> this.
>
>
>
> --
> View this message in context: 
> http://forums.openbabel.org/Java-API-setting-OBConformerScore-will-crash-application-tp4656958p4656960.html
> Sent from the General discussion mailing list archive at Nabble.com.
>
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