Geoff, It did the trick. No apparent missing dependencies anymore. Great catch! Thanks a lot,
Nick -----Original Message----- From: Geoffrey Hutchison [mailto:geoff.hutchi...@gmail.com] Sent: Tuesday, April 09, 2013 6:50 PM To: Nick Vandewiele Subject: Re: [Open Babel] removing dependency when compiling java bindings? I haven't the faintest idea why it's linking awt libraries, but I can investigate. It may be the default for JNI interfaces, but I haven't found anything obvious on Google to suggest how it can be removed, although this looks promising: http://mail-archives.apache.org/mod_mbox/qpid-commits/201301.mbox/%3C2013010 4155247.b009e2388...@eris.apache.org%3E So try this. In scripts/CMakeLists.txt, change this line: target_link_libraries(bindings_java ${JNI_LIBRARIES} ${BABEL_LIBRARY}) To: target_link_libraries(bindings_java ${BABEL_LIBRARY}) That should be equivalent to what the Apache project was doing. I don't know if it'll work, but I think it's the first thing to try. Hope that helps, -Geoff > I compiled the openbabel java bindings on "linux 64 bit" resulting in an libopenbabel_java.so file. I did this through cmake like this: > cmake ../openbabel-2.3.2 -DJAVA_BINDINGS=ON -DCMAKE_INSTALL_PREFIX=/blabla/openbabel-install -DEIGEN3_INCLUDE_DIR=/blabla/eigen-eigen > > Next, I checked whether all dependencies for libopenbabel_java.so could be found through: > ldd /blabla/openbabel-install/lib/libopenbabel_java.so > And it turned out that libmawt.so could not be found: > libmawt.so => not found > Since I believe this library is not crucial for what I'm doing (the library is AWT related, and I don't render any windows), I would like to exclude that library so that openbabel doesn't crash just because of this one missing link. > > Is there an easy fix by removing that dependency from "a" list somewhere in a cmake file? I don't consider having libmawt.so available an option. ------------------------------------------------------------------------------ Precog is a next-generation analytics platform capable of advanced analytics on semi-structured data. The platform includes APIs for building apps and a phenomenal toolset for data science. Developers can use our toolset for easy data analysis & visualization. Get a free account! http://www2.precog.com/precogplatform/slashdotnewsletter _______________________________________________ OpenBabel-discuss mailing list OpenBabel-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/openbabel-discuss
